DRSC/TRiP Functional Genomics Resources

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Protein Alignment frac and Ltbp1

DIOPT Version :9

Sequence 1:NP_001137905.1 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster
Sequence 2:NP_067598.2 Gene:Ltbp1 / 59107 RGDID:68379 Length:1712 Species:Rattus norvegicus


Alignment Length:1046 Identity:286/1046 - (27%)
Similarity:413/1046 - (39%) Gaps:311/1046 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 EEVSEREPPPPPPPPVVDGADSKPEPQIVIEINDDHANEVVESEPALAETETENEVLENE----- 213
            :.|::...|||.|        :|.||...:..:.:|...|.|.|...|..|.|...|:.|     
  Rat   755 QPVAKSTHPPPLP--------AKEEPVEALTSSREHGPGVAEPEVVTAPPEKEIPSLDQEKTRLE 811

  Fly   214 ---------------------------TPLKAEVQTDVLNSSNASVKVTNDPYEPTFLDNNC--G 249
                                       .|:..||..:...||.:.|..   |.:.|.: |.|  .
  Rat   812 PGQPQLSPGVSTIHLHPQFPVVVEKTSPPVPVEVAPEGSTSSASQVIA---PTQVTEI-NECTVN 872

  Fly   250 EDNGGCAHICKRLLYPDENQPIN-KCDCREGYTLDPNDYASCLDIDECLESNGGCSE-ICENLPG 312
            .|..|..|..        |.|:. .|.|.|||... .....|:|||||.::...||: .|||..|
  Rat   873 PDICGAGHCI--------NLPVRYTCICYEGYKFS-EQQRKCIDIDECAQAQHLCSQGRCENTEG 928

  Fly   313 EYKCSCQEGYYLDESGKSCVDINECANPELSSNCQ-GACENLPGSYRCVEPLEENPEITEVVENP 376
            .:.|.|..|:...|.|.:|:|::||..|::   |: |.|.|..|::||                 
  Rat   929 SFLCICPAGFMASEEGSNCIDVDECLRPDV---CRDGRCINTAGAFRC----------------- 973

  Fly   377 IEKTNEVPVNVSESQPAGKTCNSGFQLSADGTDCQDINECEVDGPEDLDNNAVCQQKCENTIGSF 441
                              :.|:||:::|..| .|:||:||       |..:...:::|.|:.||:
  Rat   974 ------------------EYCDSGYRMSRRG-HCEDIDEC-------LTPSTCPEEQCVNSPGSY 1012

  Fly   442 RCT-CVEGYHLLEDQ----------RSCALDSCTDLENPQL-------NRTRCAHECQDLPE--- 485
            :|. |.||:.....|          :.|...|||:||...:       :.|.....|||:.|   
  Rat  1013 QCVPCTEGFRGWNGQCLDVDECLQPKVCTNGSCTNLEGSYMCSCHKGYSPTPDHRHCQDIDECQQ 1077

  Fly   486 -------------GSYRCVCPKGYELSEDQHSCLVQESPCSTEKGVEK------CSPGTCLASED 531
                         ||:||.|.:||:||..:..|          :.:::      ||.|.|..:|.
  Rat  1078 GNLCMNGQCKNTDGSFRCTCGQGYQLSAAKDQC----------EDIDECEHRHLCSHGQCRNTEG 1132

  Fly   532 NTSFSCICPTGYRSEAFS--CQDIDECAEDTHLC-SHTCQNTPGGYQCQCPEGLNLVEEYTCLAE 593
              ||.|:|..|||:....  |:||:||.||:.:| ...|.||.|.|.|.||:||.|.:       
  Rat  1133 --SFQCLCNQGYRASVLGDHCEDINECLEDSSVCQGGDCINTAGSYDCTCPDGLQLND------- 1188

  Fly   594 NLCEVNNNGCEQI--------------CLTARGGV-CACREGFRLSADGKSCEDVDECLVNNGGC 643
                  |.||:.|              ||..:|.. |.|.:||.:||||::|||:||| |||..|
  Rat  1189 ------NKGCQDINECAQPGLCGPHGECLNTQGSFHCVCEQGFSISADGRTCEDIDEC-VNNTVC 1246

  Fly   644 QQ--VCRNLPGSYGCICAAGYELLKLDGIRGYCFDIDECSQRTHGCSDQMLCENLNGSYTCLCP- 705
            ..  .|.|..||:.|:|..|::..: || :| |.|::|| :...|...:..|||:.||:.|:|. 
  Rat  1247 DSHGFCDNTAGSFRCLCYQGFQAPQ-DG-QG-CVDVNEC-ELLSGVCGEAFCENVEGSFLCVCAD 1307

  Fly   706 --PGYA-------------LGLD-------NHIVTSLNSSFITDSTSSETPSAHTCLDIDECSLA 748
              ..|:             .|:|       .....:||.:.:.|:..:...:...|.    |:..
  Rat  1308 ENQEYSPMTGQCRSRATEDSGVDRQPKEEKKECYYNLNDASLCDNVLAPNVTKQECC----CTSG 1368

  Fly   749 NG---NCSHF-CQNE-PGGFQCACPLG----------YALSEDMRTCQDIDECL------DSNGQ 792
            .|   ||..| |..: ...|...||.|          |....:  ..:|.||||      ..|| 
  Rat  1369 AGWGDNCEIFPCPVQGTAEFSEMCPRGKGFVPAGESSYETGGE--NYKDADECLLFGEEICKNG- 1430

  Fly   793 CSQLCLNQPGGFACACETGFELTPDGFGCADIDECSQDYGNCSD-ICINLLGTHACACERGYELA 856
               .|||...|:.|.|:.|....|....|.|:||| ||..:|.| .|:|..|::.|.|.....|.
  Rat  1431 ---YCLNTQPGYECYCKEGTYYDPVKLQCFDMDEC-QDPNSCIDGQCVNTEGSYNCFCTHPMVLD 1491

  Fly   857 KDKLSCL------------DV--DECAGLLSGG--CSHECINKAGTF-ECGCPLGYILNDDGRSC 904
            ..:..|:            ||  |.|...||..  ||...:.|..|: ||.|..|...   |..|
  Rat  1492 ASEKRCVQPTESNEQIEETDVYQDLCWEHLSEEYVCSRPLVGKQTTYTECCCLYGEAW---GMQC 1553

  Fly   905 SPALVGCPPGTQRSADGCAPIECNPGYT-----LGSD-------------------DKCVD---- 941
              ||  ||   .:.:|..|.: ||...|     .|.|                   |:.::    
  Rat  1554 --AL--CP---MKDSDDYAQL-CNIPVTGRRRPYGRDALVDFSEQYGPETDPYFIQDRFLNSFEE 1610

  Fly   942 --IDECQKQNGGCSHRCSNTEGSFKCSCPPGYELDSDQKTCQDIDECDQ--DKTS-CITGTCINE 1001
              .:||...||..:.||...:..:.|.|..||.||..:.||.|::||.:  ::.| |....|||.
  Rat  1611 LQAEECGILNGCENGRCVRVQEGYTCDCFDGYHLDMAKMTCVDVNECSELNNRMSLCKNAKCINT 1675

  Fly  1002 IGGFRC 1007
            .|.::|
  Rat  1676 EGSYKC 1681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fracNP_001137905.1 FXa_inhibition 296..331 CDD:291342 12/35 (34%)
cEGF 396..415 CDD:289433 8/18 (44%)
FXa_inhibition 425..458 CDD:291342 9/43 (21%)
FXa_inhibition 476..505 CDD:291342 13/44 (30%)
vWFA <550..586 CDD:294047 19/36 (53%)
FXa_inhibition 596..630 CDD:291342 15/48 (31%)
FXa_inhibition 636..>664 CDD:291342 12/29 (41%)
EGF_CA 676..715 CDD:284955 14/61 (23%)
FXa_inhibition 745..780 CDD:291342 11/49 (22%)
FXa_inhibition 786..821 CDD:291342 12/40 (30%)
FXa_inhibition 827..862 CDD:291342 11/35 (31%)
FXa_inhibition 874..904 CDD:291342 9/32 (28%)
FXa_inhibition 945..980 CDD:291342 11/34 (32%)
CCP 1110..1170 CDD:153056
CCP 1183..1235 CDD:153056
DUF5011 1468..1536 CDD:295940
Ltbp1NP_067598.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..148
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 752..803 15/55 (27%)
8-Cys3 region. /evidence=ECO:0000250|UniProtKB:Q14766 1335..1402 14/70 (20%)
C-terminal domain. /evidence=ECO:0000250|UniProtKB:Q14766 1498..1712 52/195 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D4721at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm44463
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24034
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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