DRSC/TRiP Functional Genomics Resources

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Protein Alignment frac and hmcn2

DIOPT Version :10

Sequence 1:NP_648137.3 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster
Sequence 2:XP_001920501.5 Gene:hmcn2 / 565032 ZFINID:ZDB-GENE-030131-9765 Length:4212 Species:Danio rerio


Alignment Length:995 Identity:265/995 - (26%)
Similarity:365/995 - (36%) Gaps:320/995 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 PPPPVVDGADSKPEPQIVIEINDDHANEVVESEPALAETETENEVLEN--------------ETP 215
            |.|.:...|:::  |.....:::...:.|:.....:::..|...:.||              |.|
Zfish  3245 PTPTITWTANNR--PYTGASVDETGRSSVIFDNVTVSDGGTYACIAENTVGLIRALSFVRVREPP 3307

  Fly   216 -LKAEVQTD--VLNSSNASV--KVTNDPYEPTFLDNNCGEDNGGCAHICKRLLYPDENQPINKCD 275
             |:.|..|.  |:...:|.:  .|:.||. |:...:..|:...|...     .:|..|..:....
Zfish  3308 VLRGEAHTSQTVIQGKSAMLDCAVSGDPV-PSLRWHKDGQPLLGSLR-----FHPLRNGSLALYS 3366

  Fly   276 CREGYTLDPNDYASCLDIDECL-ESNGGCSE----ICENLPGEYK-------CSCQEGYYLDESG 328
            ...|   |..:|       .|: ||..|.:|    :...:||.|.       ||...|..:.|..
Zfish  3367 AIIG---DSGEY-------RCVAESEAGAAERTISLKVQVPGGYSNWEEWGPCSVTCGQGIQERI 3421

  Fly   329 KSCVDINE---------CANPELSS-NCQGA-CENLPG-SYR---------------CVEPLEEN 366
            :.|   |.         |..|.:.| .||.: |   || |.|               .|..||.|
Zfish  3422 RFC---NNPPPAYGGPLCEGPNVDSRKCQASLC---PGESPRRARGSLIGMVNEKEFGVAYLEAN 3480

  Fly   367 PEITEVVENPIEKTNEVPVNVSESQPA----------------------GKTCNSGFQLS----- 404
                 :.||.:|.|:.:..:|....|:                      .:...:||.::     
Zfish  3481 -----ITENDLEGTSTLEAHVENIPPSVGPLLRVLVSVFAPVYWTTVYQTQETQNGFSITEGQFR 3540

  Fly   405 ------------------ADGTDCQDI--NECEVDG---PEDLDNNAVCQQKCENTI--GS---- 440
                              |.|.|.:.:  .:..::|   |..|.:|...|:..|:.:  ||    
Zfish  3541 QESQLEFETGEILKLTHVARGLDGEGVLLVDIVINGFVPPMLLSSNLNLQEFDESYVQTGSGQLY 3605

  Fly   441 ---------------FRC--TCV-EGYH-----LLEDQRSCALDSCTDLENPQLNRTRCAHECQD 482
                           .||  |.| ||..     ||:..|...:.....|....|:....|...  
Zfish  3606 SWSTQNHIRDGAPLTLRCNHTMVFEGPESRQGPLLQLLRLTGISGTYSLYTLSLDFKMTASLL-- 3668

  Fly   483 LPEGSYRCVCPKGYELS-----EDQHSCLVQESPCSTEKGVEKCSPGTCLASEDNTSFSCICPTG 542
            :|||... .||||:.|.     .|:..|.| :||||     ..|       :.:...|||.||:|
Zfish  3669 IPEGDGE-TCPKGFILDTASYCADEDECAV-DSPCS-----HSC-------NNNMGGFSCACPSG 3719

  Fly   543 Y--RSEAFSCQDIDECAEDTHLC--SHTCQNTPGGYQCQCPEGLNLVEEYTCLAENLCEVNNNGC 603
            :  .:|:.||||||||::.:|||  :..|.||.|.|:||...||                     
Zfish  3720 FTISTESNSCQDIDECSQGSHLCHPNQQCVNTVGTYRCQAKCGL--------------------- 3763

  Fly   604 EQICLTARGGVCACREGFRLSADGKSCEDVDECLVNN-GGCQQVCRNLPGSYGCICAAGYELLKL 667
                            ||:.|..|.||||||||..:. ..|||.|.|..||:.|.|..||:|:  
Zfish  3764 ----------------GFKPSLVGTSCEDVDECQESAVSPCQQQCFNTLGSFRCTCHPGYQLV-- 3810

  Fly   668 DGIRGYCFDIDECSQRTHGCSDQMLCENLNGSYTCL--CPPGYALGLDNHIVTSLNSSFITDSTS 730
             |.|  |.||:||.:..  |.....|.|.:|.|.|.  ||.|                    .|:
Zfish  3811 -GHR--CLDINECLRNV--CPAHQQCRNTDGGYQCFDSCPAG--------------------MTA 3850

  Fly   731 SETPSAHTCLDIDECSLANGNC--SHFCQNEPGGFQCACPLGYALSEDMRTCQDIDECLDSNGQC 793
            :|.   ..|:|||||...:..|  |..|||..||:.|.||.||......|.|.|||||......|
Zfish  3851 AEN---GVCVDIDECQDGSHMCRYSQICQNTIGGYGCVCPRGYRSQGVGRPCLDIDECAQVPSPC 3912

  Fly   794 SQLCLNQPGGFACACETGFELTPDGFGCADIDECSQDYGNCSDICINLLGTHACACERGYELAKD 858
            :..|.|.||.|.|.|..|..|..||..||.: |....:.|.:.:...|......|.||.|   ..
Zfish  3913 AFQCRNVPGSFRCVCPPGTVLLGDGRSCAGL-ERGHIFTNSTRVQARLRPQLVSALERPY---LT 3973

  Fly   859 KLSCLDVDECAGLLSGGCSHECINKAGTFECGCPLGYILNDDGRSCSPALVGCPPGTQRSADGCA 923
            :||.|  .|..| .|....||           ||:||...|              ||        
Zfish  3974 RLSVL--PEHLG-SSRRPRHE-----------CPVGYTSKD--------------GT-------- 4002

  Fly   924 PIECNPGYTLGSDDKCVDIDECQKQNGGCSHRCSNTEGSFKCSCPPGYELDSDQKTCQDIDECDQ 988
                           |:|||||..:. .|.|.|.||.||::|:|||||:|.|:.:||:|||||..
Zfish  4003 ---------------CIDIDECAFRK-PCQHECRNTIGSYQCTCPPGYQLLSNGRTCKDIDECTV 4051

  Fly   989 DKTSC-ITGTCINEIGGFRC 1007
            ....| ....|.|..||::|
Zfish  4052 QGVQCGPNQMCFNTRGGYQC 4071

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fracNP_648137.3 FXa_inhibition 296..331 CDD:464251 12/46 (26%)
cEGF 396..415 CDD:463661 5/43 (12%)
FXa_inhibition 425..458 CDD:464251 14/61 (23%)
FXa_inhibition 476..505 CDD:464251 10/33 (30%)
EGF_CA 552..>581 CDD:214542 15/30 (50%)
FXa_inhibition 596..630 CDD:464251 4/33 (12%)
FXa_inhibition 636..>664 CDD:464251 12/28 (43%)
EGF_CA 676..711 CDD:214542 13/36 (36%)
FXa_inhibition 745..780 CDD:464251 14/36 (39%)
FXa_inhibition 786..821 CDD:464251 13/34 (38%)
vWFA <821..861 CDD:469594 9/39 (23%)
FXa_inhibition 874..904 CDD:464251 7/29 (24%)
FXa_inhibition 945..980 CDD:464251 16/34 (47%)
PTZ00449 <1017..>1098 CDD:185628
CCP 1110..1170 CDD:153056
CCP 1183..1235 CDD:153056
HYR 1468..1536 CDD:460572
hmcn2XP_001920501.5 Ig strand F 1221..1226 CDD:409570
Ig strand G 1234..1237 CDD:409570
Ig 1245..1335 CDD:472250
Ig strand B 1263..1267 CDD:409570
Ig strand C 1276..1280 CDD:409570
Ig strand E 1301..1305 CDD:409570
Ig strand F 1315..1320 CDD:409570
Ig strand G 1328..1331 CDD:409570
Ig 1338..1430 CDD:472250
Ig strand B 1358..1362 CDD:409353
Ig strand C 1371..1375 CDD:409353
Ig strand E 1394..1398 CDD:409353
Ig strand F 1408..1413 CDD:409353
Ig strand G 1421..1424 CDD:409353
I-set 1443..1523 CDD:400151
Ig strand B 1451..1455 CDD:409353
Ig strand C 1464..1468 CDD:409353
Ig strand E 1488..1493 CDD:409353
Ig strand F 1503..1508 CDD:409353
I-set 1538..1608 CDD:400151
Ig strand B 1546..1550 CDD:409353
Ig strand C 1559..1563 CDD:409353
Ig strand E 1582..1586 CDD:409353
Ig strand F 1596..1601 CDD:409353
Ig strand G 1610..1613 CDD:409353
ChlD <21..206 CDD:440853
IG_like 441..512 CDD:214653
Ig 516..603 CDD:472250
Ig strand B 533..537 CDD:409353
Ig strand C 546..550 CDD:409353
Ig strand E 569..573 CDD:409353
Ig strand F 583..588 CDD:409353
Ig strand G 596..599 CDD:409353
Ig_3 607..680 CDD:464046
I-set 711..784 CDD:400151
Ig strand B 714..718 CDD:409353
Ig strand C 727..731 CDD:409353
Ig strand E 750..754 CDD:409353
Ig strand F 764..769 CDD:409353
Ig strand G 777..780 CDD:409353
IG_like 794..879 CDD:214653
Ig strand B 805..809 CDD:409353
Ig strand C 818..822 CDD:409353
Ig strand E 845..849 CDD:409353
Ig strand F 859..864 CDD:409353
Ig strand G 872..875 CDD:409353
Ig 885..972 CDD:472250
Ig strand C 916..920 CDD:409353
Ig strand E 938..942 CDD:409353
Ig strand F 952..957 CDD:409353
Ig strand G 965..968 CDD:409353
Ig_3 975..1049 CDD:464046
IG_like 1083..1159 CDD:214653
Ig strand B 1089..1093 CDD:409353
Ig strand C 1102..1106 CDD:409353
Ig strand E 1125..1129 CDD:409353
Ig strand F 1139..1144 CDD:409353
Ig strand G 1152..1155 CDD:409353
I-set 1163..1241 CDD:400151
Ig strand B 1180..1184 CDD:409570
Ig strand C 1193..1197 CDD:409570
Ig strand E 1208..1211 CDD:409570
Ig 1637..1714 CDD:472250
Ig strand B 1644..1648 CDD:409353
Ig strand C 1657..1661 CDD:409353
Ig strand E 1680..1684 CDD:409353
Ig strand F 1694..1699 CDD:409353
IG_like 1753..1830 CDD:214653
Ig strand B 1760..1764 CDD:409353
Ig strand C 1773..1777 CDD:409353
Ig strand E 1796..1800 CDD:409353
Ig strand F 1810..1815 CDD:409353
Ig strand G 1823..1826 CDD:409353
I-set 1834..1918 CDD:400151
Ig strand B 1855..1859 CDD:409256
Ig strand C 1868..1872 CDD:409256
Ig strand E 1891..1895 CDD:409256
Ig strand F 1905..1910 CDD:409256
Ig strand G 1918..1921 CDD:409256
Ig 1939..2017 CDD:472250
Ig strand B 1947..1951 CDD:409256
Ig strand C 1960..1964 CDD:409256
Ig strand E 1983..1987 CDD:409256
Ig strand F 1997..2002 CDD:409256
Ig strand G 2010..2013 CDD:409256
I-set 2038..2110 CDD:400151
Ig strand B 2042..2046 CDD:409353
Ig strand C 2055..2059 CDD:409353
Ig strand F 2090..2095 CDD:409353
Ig_3 2113..2189 CDD:464046
Ig_3 2205..2282 CDD:464046
I-set 2307..2391 CDD:400151
Ig strand B 2321..2325 CDD:409353
Ig strand C 2334..2338 CDD:409353
Ig strand E 2357..2361 CDD:409353
Ig strand F 2371..2376 CDD:409353
I-set 2400..2484 CDD:400151
Ig strand B 2414..2418 CDD:409353
Ig strand C 2427..2431 CDD:409353
Ig strand E 2447..2454 CDD:409353
Ig strand F 2464..2469 CDD:409353
Ig_3 2487..2562 CDD:464046
Ig 2599..2667 CDD:472250
Ig strand B 2599..2603 CDD:409353
Ig strand C 2612..2616 CDD:409353
Ig strand E 2635..2639 CDD:409353
Ig strand F 2649..2654 CDD:409353
IG_like 2679..2760 CDD:214653
Ig strand B 2690..2694 CDD:409353
Ig strand C 2703..2707 CDD:409353
Ig strand E 2726..2730 CDD:409353
Ig strand F 2740..2745 CDD:409353
Ig_3 2764..2839 CDD:464046
Ig 2857..2943 CDD:472250
Ig strand B 2873..2877 CDD:409353
Ig strand C 2886..2890 CDD:409353
Ig strand E 2909..2913 CDD:409353
Ig strand F 2923..2928 CDD:409353
Ig strand G 2936..2939 CDD:409353
Ig_3 2946..3020 CDD:464046
Ig_3 3036..3110 CDD:464046
IG_like 3133..3214 CDD:214653
Ig strand B 3144..3148 CDD:409353
Ig strand C 3157..3161 CDD:409353
Ig strand E 3180..3184 CDD:409353
Ig strand F 3194..3199 CDD:409353
Ig strand G 3207..3210 CDD:409353
Ig 3218..3293 CDD:472250 8/49 (16%)
Ig strand B 3235..3239 CDD:409353
Ig strand C 3248..3252 CDD:409353 0/3 (0%)
Ig strand E 3269..3273 CDD:409353 1/3 (33%)
Ig strand F 3283..3288 CDD:409353 1/4 (25%)
I-set 3316..3394 CDD:400151 18/93 (19%)
Ig strand B 3325..3329 CDD:409353 1/3 (33%)
Ig strand C 3338..3342 CDD:409353 0/3 (0%)
Ig strand E 3360..3364 CDD:409353 0/3 (0%)
Ig strand F 3374..3379 CDD:409353 2/11 (18%)
Ig strand G 3387..3390 CDD:409353 1/2 (50%)
TSP1 3401..3452 CDD:214559 12/56 (21%)
G2F 3454..3636 CDD:462175 31/186 (17%)
EGF_CA 3691..3721 CDD:214542 14/42 (33%)
EGF_CA 3731..3775 CDD:214542 22/80 (28%)
EGF_CA 3776..3814 CDD:214542 19/42 (45%)
EGF_CA 3816..3849 CDD:238011 13/54 (24%)
EGF_CA 3858..3889 CDD:429571 15/30 (50%)
EGF_CA 3901..3940 CDD:214542 17/38 (45%)
EGF_CA 4005..4044 CDD:214542 21/39 (54%)
EGF_CA 4045..4085 CDD:214542 11/27 (41%)
Blue background indicates that the domain is not in the aligned region.

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