DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment frac and ltbp1

DIOPT Version :10

Sequence 1:NP_648137.3 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster
Sequence 2:XP_017207300.2 Gene:ltbp1 / 562072 ZFINID:ZDB-GENE-091202-8 Length:1527 Species:Danio rerio


Alignment Length:926 Identity:263/926 - (28%)
Similarity:349/926 - (37%) Gaps:243/926 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 PLKAEVQTDVLNSSNASVK--VTNDPYEPTFLDNNCGEDNGGCAHICKRLLYPDENQPINKCD-- 275
            |.....|||....:|.:::  |..||..|                      :|...||:....  
Zfish   684 PPNGHTQTDGQGYNNPTIRHQVPMDPPVP----------------------FPTLQQPVEALSIT 726

  Fly   276 ---------------------CREGYTLDPNDYASCLDIDECLESNGGC-SEICENLPGEYKCSC 318
                                 ..||..:.|...|   :||||:.....| :.||.|....|.|.|
Zfish   727 ERQLPEVVEKVSPPAPVAIPPSNEGQDITPTQLA---EIDECVVRPDICGAGICYNTAESYTCFC 788

  Fly   319 QEGYYLDESGKSCVDINECA-NPELSSNCQGACENLPGSYRCVEPLEENPEITEVVENPIEKTNE 382
            .:||..|..|.:|||::||| ||.|.:|  |.|:|.||.:.||                      
Zfish   789 DDGYRTDSEGTTCVDVDECAENPSLCAN--GRCQNTPGGFLCV---------------------- 829

  Fly   383 VPVNVSESQPAGKTCNSGFQLSADGTDCQDINECEVDGPEDLDNNAVCQQ-KCENTIGSFRCT-C 445
                          |..||..:..|:.|.||:||:        |...|.. .|.||:|||.|: |
Zfish   830 --------------CELGFMPNERGSSCSDIDECQ--------NRRACPSGLCYNTLGSFMCSPC 872

  Fly   446 VEGYHLLEDQRSCALDSCTDLENPQLNRTRCAH-ECQDLPEGSYRCVCPKGYELSEDQHSCL-VQ 508
            .:|:.....|       |.|: |..|:...||| :|.:| ||.:.|.|.:|:..:.|..||. :.
Zfish   873 PDGFEGKNGQ-------CVDI-NECLDERVCAHGQCSNL-EGYFVCTCDEGFLPTPDGKSCTDID 928

  Fly   509 ESPCSTEKGVEKCSPGTCLASEDNT--SFSCICPTGYR--SEAFSCQDIDECAEDTHLCSHT--C 567
            |  |..:   ..|..|.|    .||  ||.|.|..|::  |....|:|:|||......|...  |
Zfish   929 E--CQDD---NVCIQGHC----QNTQGSFICNCEPGFKLSSSGDQCEDVDECLVIPQTCDGVGQC 984

  Fly   568 QNTPGGYQCQCPEGLNLVEEYTCLAENLCEVNNNGC--EQICLTARGG-VCACREGFRLSADGKS 629
            .|..|.|||.||:|...|...:||..:.||.:...|  ...||...|. :|.|..||..:..|  
Zfish   985 VNILGSYQCNCPQGYRQVNSTSCLDVDECEDDTQLCIPNGECLNTEGSFLCVCDAGFVSTRTG-- 1047

  Fly   630 CEDVDECLVNNGGC--QQVCRNLPGSYGCICAAGYELLKLDGIRGY-CFDIDECSQRTHGCSDQM 691
            |:|||||.:|...|  ...|:|..||:.|.|..|::    |...|. |.|::||....:.|. :.
Zfish  1048 CQDVDECSLNENTCGSHGTCQNTIGSFICQCDPGFK----DSQDGQGCVDVNECELLGNVCG-EA 1107

  Fly   692 LCENLNGSYTCLCP-------PGYALGLDNHIVT---------SLNSSFITDSTSSETPSAHTCL 740
            .|||..|::.||||       |.....:....||         :||...:.|...:.:.:...|.
Zfish  1108 TCENREGTFLCLCPDDLQEFDPMLGKCISTPPVTTVERKECYFNLNDENLCDKVLASSMTKEECC 1172

  Fly   741 DIDECSLANG---NCS-HFCQNEPG--GFQCACPL--GYALSED---------MRTCQDIDEC-L 787
                |:|..|   ||. |.|. .||  .|...||.  ||.:|.|         ..|..|.||| |
Zfish  1173 ----CTLGAGWGDNCEVHPCP-IPGTDQFSQMCPAGRGYLISGDPMSTTSSLAENTKADADECQL 1232

  Fly   788 DSNGQCSQ-LCLNQPGGFACACETGFELTPDGFGCADIDECSQDYGNCSD-ICINLLGTHACACE 850
            ..:..|.. .|||..|.:.|.|::|.........|.|.||| ||...|.| .|:|..|::.|.|.
Zfish  1233 FGSEICKDGFCLNTAGWYECYCKSGLYYDESKLQCLDTDEC-QDEAKCRDGECMNTYGSYQCFCT 1296

  Fly   851 RGYELAKDKLSCLDVDEC----AGLLSGGC------SHECINKAGTF-----ECGCPLGYILNDD 900
            ....||.|...|:..|..    |.|.||.|      :..|.|.....     ||.|..|....:|
Zfish  1297 PPMVLAMDNTHCILPDVAGQSEADLYSGVCWERVTENFSCANPITNIHTSFTECCCLYGEAWGND 1361

  Fly   901 GRSCSPALVGCPPG--TQRSADGC-------------APIECNPGYT---LGSDDKCVDI----- 942
            ...|        ||  |...|..|             .||..:|.|.   |..|.....|     
Zfish  1362 CALC--------PGKNTDSYAQMCNIRRPYGRDALVAGPIGVSPDYNPQPLNPDGMLPYIEDYDE 1418

  Fly   943 -------------DECQKQNGGCSHRCSNTEGSFKCSCPPGYELDSDQKTCQDIDECDQ---DKT 991
                         :||...||..:.||...:..:.|.|..||.||..:..|.||:||.:   ..:
Zfish  1419 PRNPYDAFEGLRAEECGVLNGCENGRCVRVQEGYTCDCFDGYTLDMSRMACVDINECSELNAKMS 1483

  Fly   992 SCITGTCINEIGGFRC 1007
            .|..|.|||..|.::|
Zfish  1484 LCKNGNCINTQGSYKC 1499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fracNP_648137.3 FXa_inhibition 296..331 CDD:464251 12/35 (34%)
cEGF 396..415 CDD:463661 7/18 (39%)
FXa_inhibition 425..458 CDD:464251 12/34 (35%)
FXa_inhibition 476..505 CDD:464251 11/29 (38%)
EGF_CA 552..>581 CDD:214542 13/30 (43%)
FXa_inhibition 596..630 CDD:464251 11/36 (31%)
FXa_inhibition 636..>664 CDD:464251 10/29 (34%)
EGF_CA 676..711 CDD:214542 13/41 (32%)
FXa_inhibition 745..780 CDD:464251 16/51 (31%)
FXa_inhibition 786..821 CDD:464251 10/36 (28%)
vWFA <821..861 CDD:469594 17/40 (43%)
FXa_inhibition 874..904 CDD:464251 9/40 (23%)
FXa_inhibition 945..980 CDD:464251 11/34 (32%)
PTZ00449 <1017..>1098 CDD:185628
CCP 1110..1170 CDD:153056
CCP 1183..1235 CDD:153056
HYR 1468..1536 CDD:460572
ltbp1XP_017207300.2 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.