DRSC/TRiP Functional Genomics Resources

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Protein Alignment frac and bmp1b

DIOPT Version :10

Sequence 1:NP_648137.3 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster
Sequence 2:XP_005155463.1 Gene:bmp1b / 559877 ZFINID:ZDB-GENE-060818-2 Length:970 Species:Danio rerio


Alignment Length:510 Identity:117/510 - (22%)
Similarity:173/510 - (33%) Gaps:157/510 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   563 CSHTCQNTPGGYQCQ-CPEGLNLVEEYTCLAENLCEVNNNGCEQICLT------ARGGVC----- 615
            |..:.|::.|.:... .|.|      |......:..::....|:|.|.      .|..:|     
Zfish   305 CGESLQDSAGNFSSPGFPNG------YAAYLHCIWRISVTPGEKIVLNFTSMDLYRSNLCWYDYV 363

  Fly   616 ACREGFRLSA--DGKSCED-VDECLVNNGGCQQV-CRNLPGSYGCICAAGYELLKLDGIRGYCFD 676
            ..|:|:..||  .|:.|.| :.|.:|:......: .|:.....|...:|.||.:           
Zfish   364 EVRDGYGRSAPLKGRICGDQLPEAIVSTDSELWIEFRSTSNWVGKGFSAVYEAI----------- 417

  Fly   677 IDECSQRTHGCSDQMLCENLNGSY----TCL----CPPGYALGL-------DNHIVTSLNSSFIT 726
               |.......|.|:...|....|    .|:    .|.|:.:||       :.|...:.:...:.
Zfish   418 ---CGGEVRRDSGQIESPNYPDDYRPNKACIWKIVVPEGFHVGLVFQSFEIEKHDNCAYDYLEVR 479

  Fly   727 DSTSSETPSAHTCLDIDECSLANGNCSHFCQNEPGGFQCACPLGYALSEDMRTCQDIDECLDSNG 791
            |..|..:|.                ...||             ||...:|.::        .|| 
Zfish   480 DGDSESSPL----------------LGRFC-------------GYEKPDDFKS--------SSN- 506

  Fly   792 QCSQLCLN-------QPGGFACACETGFELTPDGFGCADIDECSQ-DYGNCSDICINLLGTHACA 848
               ||.:.       ...|||.   ..|:         :|||||: |..:|...|||.||:..||
Zfish   507 ---QLWMKFVSDGSVNKAGFAA---NFFK---------EIDECSRPDNAHCEQRCINTLGSFHCA 556

  Fly   849 CERGYELAKDKLSCLDVDECAGLLS------------------GGCSHECINKA--------GTF 887
            |:.|:|||.|:.||. ...|.|.:|                  ..|..:.|...        ..|
Zfish   557 CDPGFELAPDRRSCA-AAACGGFISKLNGSFTSPGWPQEYPPNKNCVWQLIAPVQYRITLLFDAF 620

  Fly   888 ECG----CPLGYILNDDGRSCSPALVGCPPGTQRSADGCAPIECNPGYTLGSDDKCV-------- 940
            |..    |...|:....|.|....|.|...||::..  ....:.|........|..|        
Zfish   621 EMEGNDVCKYDYVEVHSGLSADGKLHGKFCGTEKPE--AITSQLNSMSVEFKSDNTVSKRGFKAQ 683

  Fly   941 ---DIDECQKQNGGCSHRCSNTEGSFKCSCPPGYELDSDQKTCQDIDECDQDKTS 992
               |:|||.::||||.|.|.||.||:.|.|..|:.|.|::..|:::. |||..||
Zfish   684 FFSDMDECSRENGGCQHECVNTFGSYSCQCRSGFVLHSNKHDCKEVG-CDQAITS 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fracNP_648137.3 FXa_inhibition 296..331 CDD:464251
cEGF 396..415 CDD:463661
FXa_inhibition 425..458 CDD:464251
FXa_inhibition 476..505 CDD:464251
EGF_CA 552..>581 CDD:214542 4/18 (22%)
FXa_inhibition 596..630 CDD:464251 10/46 (22%)
FXa_inhibition 636..>664 CDD:464251 5/28 (18%)
EGF_CA 676..711 CDD:214542 8/42 (19%)
FXa_inhibition 745..780 CDD:464251 5/34 (15%)
FXa_inhibition 786..821 CDD:464251 8/41 (20%)
vWFA <821..861 CDD:469594 20/40 (50%)
FXa_inhibition 874..904 CDD:464251 7/41 (17%)
FXa_inhibition 945..980 CDD:464251 16/34 (47%)
PTZ00449 <1017..>1098 CDD:185628
CCP 1110..1170 CDD:153056
CCP 1183..1235 CDD:153056
HYR 1468..1536 CDD:460572
bmp1bXP_005155463.1 ZnMc_BMP1_TLD 109..303 CDD:239808
CUB 305..414 CDD:395345 23/114 (20%)
CUB 418..527 CDD:395345 26/152 (17%)
FXa_inhibition 538..570 CDD:464251 15/31 (48%)
CUB 575..684 CDD:395345 18/110 (16%)
FXa_inhibition 691..726 CDD:464251 16/34 (47%)
CUB 731..840 CDD:395345 5/7 (71%)
CUB 844..957 CDD:395345
Blue background indicates that the domain is not in the aligned region.

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