DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment frac and fbn2a

DIOPT Version :9

Sequence 1:NP_001137905.1 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster
Sequence 2:XP_021334963.1 Gene:fbn2a / 558217 ZFINID:ZDB-GENE-090112-4 Length:698 Species:Danio rerio


Alignment Length:731 Identity:192/731 - (26%)
Similarity:267/731 - (36%) Gaps:194/731 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 PAGKTCNSGFQLSA--------DGTDCQ-DINECEVDGPEDLDNNAVCQQKCEN---TIGSFRCT 444
            |.|:|..:.|..|:        :|..|: |..:|............||::.|:|   .||..||.
Zfish     5 PGGQTATTCFTKSSKQCNIRCMNGGVCEDDYCQCPKGYTGSFCGQPVCEKNCQNGGHCIGPNRCA 69

  Fly   445 CVEGYHLLEDQRSCALDSCTDLENPQLNRTRCAHECQDLPEGSYRCVCPKGYELSEDQHSCLVQE 509
            |  ||.....|  |..|..|.....|::..:||.:..:.......|....|.........|....
Zfish    70 C--GYGFTGPQ--CERDYRTGPCFIQVHSRKCAGQSSEFVCSKALCCATVGQAWGHSCEQCPPIS 130

  Fly   510 SPC------STEKGV-----------EKCSPGTCLASEDNT--SFSCICPTGYRSEA--FSCQDI 553
            |||      :|..|.           :.|..|.|:    ||  |:.|.||.||:...  ..|:|:
Zfish   131 SPCTRGFIPNTRTGACQDVDECKVVPDLCKGGRCI----NTLGSYQCTCPVGYQQHVSILKCEDV 191

  Fly   554 DECAEDTHLC--SHTCQNTPGGYQCQCPEGLNLVEEYTCLAENLCEVNNNGCEQICLTARGGVCA 616
            |||:.....|  .| |.|:.|.:.|.||.|..|..:.|                .||....|:| 
Zfish   192 DECSTIERACEAGH-CINSAGSFSCVCPSGYVLSADRT----------------RCLDQHTGIC- 238

  Fly   617 CREGFRLSADGKSCEDVD------ECLVNNGGC------QQVCRNLPGS--YGCICAAGYELLKL 667
                |....:|:...::.      :|..:.|.|      .::| .:|||  |..||..|      
Zfish   239 ----FASVVNGRCAHEISGRFNKIQCCCDRGRCWSQRTTHEMC-PVPGSDEYLRICLVG------ 292

  Fly   668 DGIRGYCFDIDECSQRTHGC-----SDQML-CENLNGSY-------------------------- 700
            ..:.||..:..|.|...|..     :||:| ..|.||..                          
Zfish   293 SALSGYNEEDPEMSPHHHSSFSVSPNDQILHPHNGNGQIKPQIRQTPQILQFPQIPQIPRHDNGF 357

  Fly   701 --------------TC-----LCPPGYALGLDNHIVTSLNSSFITDSTSSETPSAHTCLDIDECS 746
                          .|     ||..|..:.:::......|:.|..|:...       |.|:|||.
Zfish   358 KPQRPVVSVNETVNRCRLLPNLCLNGRCIPMESDYRCDCNTGFKEDNRGE-------CSDVDECE 415

  Fly   747 L---ANGNCSHFCQNEPGGFQCACPLGYALSEDMRTCQDIDECLDSNGQCSQ-LCLNQPGGFACA 807
            .   |||||.    |.||.:.|.|..|:......:||.||||||.:...|.. .|||..|.|.|.
Zfish   416 FDPCANGNCI----NTPGSYYCRCHTGFLRVPGKQTCIDIDECLQNGVLCKNGRCLNTEGSFQCI 476

  Fly   808 CETGFELTPDGFGCADIDECSQDYGNCSDICINLLGTHACACERGYELAKDKLSCLDVDECAGLL 872
            |.:||:|:|||..|.|.|||:......:.:|||..|:..|.|:.|:.|......|.|:|||.  .
Zfish   477 CNSGFKLSPDGRNCVDHDECAATNMCLNGMCINEDGSFKCVCKPGFTLNSSGRYCTDIDECR--T 539

  Fly   873 SGGCSH-ECINKAGTFECGCPLGYILNDDGRSCSPALVG-----------CPPGTQRS------- 918
            .|.|.: .|:|..|:|.|.|..|..:..|||:|....:.           |....||:       
Zfish   540 PGVCMNGRCVNTQGSFRCECFAGLTVGIDGRTCVDTHMRSTCYGAVKRGLCLRPFQRAVTKSQCC 604

  Fly   919 --------ADGCAP----------IECNPGYTLGSDDKCVDIDECQKQNGGCSHR-CSNTEGSFK 964
                    .:.|.|          :.|..|....:|.|  ||:||......||:. |.|..|:|:
Zfish   605 CANPDYAFGEPCHPCPAKHSAEFQVLCASGVGFSADGK--DINECALDPDICSNGVCENLRGNFR 667

  Fly   965 CSCPPGYELDSDQKTC 980
            |.|..|||.|...:.|
Zfish   668 CVCNIGYESDQSGRNC 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fracNP_001137905.1 FXa_inhibition 296..331 CDD:291342
cEGF 396..415 CDD:289433 6/27 (22%)
FXa_inhibition 425..458 CDD:291342 12/35 (34%)
FXa_inhibition 476..505 CDD:291342 4/28 (14%)
vWFA <550..586 CDD:294047 15/37 (41%)
FXa_inhibition 596..630 CDD:291342 6/33 (18%)
FXa_inhibition 636..>664 CDD:291342 11/35 (31%)
EGF_CA 676..715 CDD:284955 13/89 (15%)
FXa_inhibition 745..780 CDD:291342 12/37 (32%)
FXa_inhibition 786..821 CDD:291342 16/35 (46%)
FXa_inhibition 827..862 CDD:291342 9/34 (26%)
FXa_inhibition 874..904 CDD:291342 12/30 (40%)
FXa_inhibition 945..980 CDD:291342 13/35 (37%)
CCP 1110..1170 CDD:153056
CCP 1183..1235 CDD:153056
DUF5011 1468..1536 CDD:295940
fbn2aXP_021334963.1 EGF_CA 148..180 CDD:214542 10/35 (29%)
vWFA <188..226 CDD:320736 15/38 (39%)
TB 247..288 CDD:307020 8/41 (20%)
EGF_CA 410..>439 CDD:214542 14/32 (44%)
cEGF 472..495 CDD:315355 11/22 (50%)
cEGF 513..536 CDD:315355 6/22 (27%)
EGF_CA 533..573 CDD:214542 16/41 (39%)
TB 590..630 CDD:307020 5/39 (13%)
EGF_CA 643..683 CDD:328759 16/39 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D4721at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100900
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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