DRSC/TRiP Functional Genomics Resources

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Protein Alignment frac and matn3a

DIOPT Version :9

Sequence 1:NP_001137905.1 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster
Sequence 2:NP_001004007.1 Gene:matn3a / 445503 ZFINID:ZDB-GENE-040822-21 Length:337 Species:Danio rerio


Alignment Length:158 Identity:35/158 - (22%)
Similarity:62/158 - (39%) Gaps:49/158 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 NEVPVNVSESQP-------AGKTCNSGFQLSADGTDCQDINECEVDGPEDLDNNAVCQQKCENTI 438
            ::|.:.|::.:|       :.....||.::.|.|.|..|:...::.....|:::..         
Zfish   169 SKVAIIVTDGRPQDQVEEVSAAARASGIEIYAVGVDRADMRSLKLMASNPLEDHVF--------- 224

  Fly   439 GSFRCTCVEGYHLLEDQRS------CALDSCTDLENPQLNRTRCAHECQDL---PEGSYRCVCPK 494
                  .||.|.::|...|      |.:|:|.           ..|:|:.:   ...||.|.|.|
Zfish   225 ------YVETYGVIEKLTSKFRETLCGMDACA-----------MGHDCEHICVSSGSSYYCQCRK 272

  Fly   495 GYELSEDQHSCLVQ-------ESPCSTE 515
            ||.|:|||.:|.::       :.||..|
Zfish   273 GYILNEDQKTCALKQVKVEIVQDPCMCE 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fracNP_001137905.1 FXa_inhibition 296..331 CDD:291342
cEGF 396..415 CDD:289433 6/18 (33%)
FXa_inhibition 425..458 CDD:291342 5/38 (13%)
FXa_inhibition 476..505 CDD:291342 13/31 (42%)
vWFA <550..586 CDD:294047
FXa_inhibition 596..630 CDD:291342
FXa_inhibition 636..>664 CDD:291342
EGF_CA 676..715 CDD:284955
FXa_inhibition 745..780 CDD:291342
FXa_inhibition 786..821 CDD:291342
FXa_inhibition 827..862 CDD:291342
FXa_inhibition 874..904 CDD:291342
FXa_inhibition 945..980 CDD:291342
CCP 1110..1170 CDD:153056
CCP 1183..1235 CDD:153056
DUF5011 1468..1536 CDD:295940
matn3aNP_001004007.1 vWFA 61..282 CDD:294047 31/138 (22%)
Matrilin_ccoil 292..334 CDD:287378 3/9 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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