DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment frac and susd1

DIOPT Version :9

Sequence 1:NP_001137905.1 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster
Sequence 2:NP_989222.1 Gene:susd1 / 394830 XenbaseID:XB-GENE-944710 Length:904 Species:Xenopus tropicalis


Alignment Length:1016 Identity:215/1016 - (21%)
Similarity:321/1016 - (31%) Gaps:327/1016 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   606 ICLTARGGVCACREGFRLSADG----KSCEDVDECLVNNGGCQQVCRNLPGSYGCICAAGYELLK 666
            :||..   ...|....:..|.|    |.|.....||..|           ..|.|||..|.    
 Frog    14 LCLAL---ALPCHAQLQDDASGQDVCKKCHTNATCLERN-----------KKYSCICNYGL---- 60

  Fly   667 LDGIRGYCFDIDECSQRTHG-CSDQMLCENLNGSYTCLCPPGYALGLDNHIVTSLNSSFI-TDST 729
            :...|.:|.|.|||...::. |.:...|.|.:||:.|:|..||... :||      ..|| .|.|
 Frog    61 IGNGRTHCLDKDECQIGSYKICGNHTACHNTHGSFFCVCLDGYRPS-NNH------KHFIPNDGT 118

  Fly   730 SSETPSAHTCLDIDECSLANGNCSH--FCQNEPGGFQCACPLGYALSEDMRTCQDIDECLDSNGQ 792
                    .|.|||||..|: .|.:  .|:|.||.::|.|..||.|               .|| 
 Frog   119 --------FCTDIDECESAD-ICGYKGKCKNIPGSYECYCMDGYQL---------------KNG- 158

  Fly   793 CSQLCLNQPGGFACACETGFELTPDGFGCADIDEC-SQDYGNCSDICINLLGTHACACERGYELA 856
                  .:|          |:...|. ||.|:||| ::|....:..|.|:.|.|.|.|..||.  
 Frog   159 ------TEP----------FQANSDN-GCVDVDECEAEDICGHNAKCRNVPGNHECYCMEGYR-- 204

  Fly   857 KDKLSCLDVDECAGLLSGGC----SHECINKAGTFECGCPLGYILNDDGRSCSPALVGCPPGTQR 917
                           |:.|.    :|..:|.....:||.|             |||:    .:|.
 Frog   205 ---------------LNNGTEPFQAHSRMNLCSVIDCGQP-------------PALL----HSQM 237

  Fly   918 SADGCAPIECNPGYTLGSDDKCVDIDECQKQNGGCSHRC----SNTEGSFKCSCPPGYELDSDQK 978
            :.:|        ..|.||.               .::||    :.|.|.....|......:....
 Frog   238 NLEG--------NTTFGSQ---------------VTYRCDAGFTATAGRAMSICTSNGTWEGASL 279

  Fly   979 TCQDIDECDQDKTSCITGTCINEIGGFRCEFPKFPVLPEIPTASSLPESPKIELKTPKYPDFTEL 1043
            .|..||                      |.||  ||:|.....||               |.|..
 Frog   280 VCTVID----------------------CGFP--PVVPNALINSS---------------DNTTF 305

  Fly  1044 SNEIPENPKK--PAEFDYPEPKFPSLPKWEGLPKLPPLADIPTSKAPVPLRPEVPKSLWVNQLQP 1106
            .:.:.....|  .|...|...:.....|||.......:.|..                     ||
 Frog   306 GSNVTYTCMKGYVASSGYGFARCAQNGKWEAATLSCQVVDCG---------------------QP 349

  Fly  1107 RDLCPRFQAPRNGKSHCNRYRHKQKLF-----YYSRCRISCNSGYILQ-GPEIKSCDANGIWEGP 1165
                |..|             |....|     ..:.....|.|||:.| |..|..|:.:|.|:|.
 Frog   350 ----PSIQ-------------HTSSKFARNTTLGNTIAYECMSGYVKQSGNGIAVCNEDGEWDGA 397

  Fly  1166 ETKCVAINQPRAQSPGICPALKPAQNGVILPASCTQGPSRFGDVCRLQCNAGFVSTGS-LLTACM 1229
            :..|..||         |....|..|..::    ..|.:..|.....:|..|:.:.|: .::.|.
 Frog   398 DLICKEIN---------CGLPPPVPNTQVI----LSGTTNLGSEVEYKCVHGYYNPGNRSVSRCT 449

  Fly  1230 MLQGWSFGADLNCQP----FGNGLLGNQLSPMWNSPKTVTPHQIQNVEQIRPYINCPENVVILLH 1290
            :.:.|. ..::.|:.    .||..:.|:....|.....:...:|.....|             |.
 Frog   450 LNEKWE-EVNVTCKVIGILIGNVTVFNETCLRWRKSSEIIDWEILYKFSI-------------LG 500

  Fly  1291 AGEQKAHVTLQRPQTNVKNGRLVAHPAWAGQLQGHLPAGVHKVDFRVNDPE-TKLTIKCHTIITV 1354
            .|..:.|      ..:.|:.:|:.:.::  |....||...:.|..|...|| .:::|.    ||:
 Frog   501 KGWHQIH------YVHEKDFKLLTNNSF--QCLDLLPGNNYLVIMRAVFPEMQEISIN----ITL 553

  Fly  1355 KAATPRESNPFTLFRIS--DYSRSSLPRP--APFATLSTGSSFSFP------AFKALDATPKPVS 1409
            :.|..:.....|||..:  .:::||....  ..:..|..|..:..|      .|....::..|| 
 Frog   554 ETAMIKRFGDITLFNTTCLQWTKSSGKNEELEEYTVLIKGQVWKPPKISLNIMFNFSTSSRNPV- 617

  Fly  1410 FTKFQVFPDSE---SSEHSKLGSSSFFRLEPLFHESSKLISAAPASSENTRVDLGSDTSNYCPPS 1471
             ....:.|:.|   :...|..|.||......|.|:|..:...||. .||......|...|.....
 Frog   618 -LCLMLPPEEEYIVNVTESSTGLSSSIPFRTLGHDSEDVSGTAPL-GENCLQWNRSIEENGVQEI 680

  Fly  1472 IEVYLKENQNLRSVVWDEPRFEGKLLKIYKSHFPGS---LFKVGDHAIKYEATTTDGKTLSCTFF 1533
            ..::::|.|.       :|:...:||....|...|:   .||:          .||.:.|:.|  
 Frog   681 YRIHVQEAQG-------QPKPNPQLLLFNISTDQGTSQVCFKI----------ATDQQQLNMT-- 726

  Fly  1534 IYVRSAKPTPAPTE-----------PKISFDSEPETLSDVS 1563
                   ..|:|.|           ||:.|.|:...|..||
 Frog   727 -------EAPSPPEANTTRELDTPLPKVQFVSKYGQLPKVS 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fracNP_001137905.1 FXa_inhibition 296..331 CDD:291342
cEGF 396..415 CDD:289433
FXa_inhibition 425..458 CDD:291342
FXa_inhibition 476..505 CDD:291342
vWFA <550..586 CDD:294047
FXa_inhibition 596..630 CDD:291342 6/27 (22%)
FXa_inhibition 636..>664 CDD:291342 8/27 (30%)
EGF_CA 676..715 CDD:284955 13/39 (33%)
FXa_inhibition 745..780 CDD:291342 12/36 (33%)
FXa_inhibition 786..821 CDD:291342 5/34 (15%)
FXa_inhibition 827..862 CDD:291342 10/35 (29%)
FXa_inhibition 874..904 CDD:291342 6/33 (18%)
FXa_inhibition 945..980 CDD:291342 5/38 (13%)
CCP 1110..1170 CDD:153056 15/65 (23%)
CCP 1183..1235 CDD:153056 9/52 (17%)
DUF5011 1468..1536 CDD:295940 13/70 (19%)
susd1NP_989222.1 EGF_CA 39..66 CDD:389777 9/41 (22%)
EGF_CA 70..108 CDD:214542 13/38 (34%)
EGF_CA 122..157 CDD:238011 16/50 (32%)
EGF_CA 172..204 CDD:214542 12/31 (39%)
PHA02927 190..394 CDD:222943 62/337 (18%)
CCP 406..462 CDD:153056 10/60 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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