DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment frac and yl

DIOPT Version :9

Sequence 1:NP_001137905.1 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster
Sequence 2:NP_996433.1 Gene:yl / 32367 FlyBaseID:FBgn0004649 Length:1984 Species:Drosophila melanogaster


Alignment Length:1483 Identity:274/1483 - (18%)
Similarity:401/1483 - (27%) Gaps:675/1483 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PEDPKVSDSLAASLDMSCSSAKILPPEINHGRVSVFDRRRRGKKVFLVAFFVCDDNYDFENGISE 98
            |:....||.:|     .|..|:|..|  ..|.:....|..|.|:      :|||...|..:|..|
  Fly   208 PDCTDKSDEVA-----GCKQAEITCP--GEGHLCANGRCLRRKQ------WVCDGVDDCGDGSDE 259

  Fly    99 MFCSNQKWVDEIPTCIPQL-NFEEHDEKVGYDLEDYSDETVPNDYVENSDIDEDDDEEVSEREPP 162
            ..|.|        .|.||. .|...:.:....|.:..|        .:||..:..||        
  Fly   260 RGCLN--------LCEPQKGKFLCRNRETCLTLSEVCD--------GHSDCSDGSDE-------- 300

  Fly   163 PPPPPPVVDGADSKPEPQIVIEINDDHANEVVESEPALAETETENEVLENETPLKAEVQTDVLNS 227
                   .|...|||:                                                 
  Fly   301 -------TDLCHSKPD------------------------------------------------- 309

  Fly   228 SNASVKVTNDPYEPTFLDNNCGEDNGGCAHICKRLLYPDENQPINKCDCREGYTLDPNDYASCLD 292
                                |  |...||...|..:.|....   :|.|.:|:.|...: ..|.|
  Fly   310 --------------------C--DAKKCALGAKCHMMPASGA---ECFCPKGFRLAKFE-DKCED 348

  Fly   293 IDECLESNGGCSEICENLPGEYKCSCQEGYYLDESGKSCVDINECANPELSSNCQGACENLPGSY 357
            :|||.|.:..||:.|||..|.|:|.|..||.||:..::|..:           ..|:.|.     
  Fly   349 VDECKEQDDLCSQGCENTSGGYRCVCDAGYLLDKDNRTCRAV-----------VYGSKEQ----- 397

  Fly   358 RCVEPL---------------EEN---------PEITEVVENPIEKTNEVPVNVSESQPAGKTCN 398
               :||               |:|         ..:::|:....:.::....|:...      ..
  Fly   398 ---QPLLLYTTQMTIMGMHLREDNVRNHVYQVAGNLSKVIGVAYDGSHIYWTNIQNE------AE 453

  Fly   399 SGFQLSADGTDCQDINECEVDGPEDL------------DN----NAVC----------------- 430
            |..:.:.||::.:.:....:|.||||            ||    .|||                 
  Fly   454 SIVKANGDGSNAEILLTSGLDAPEDLAVDWLTQNIYFSDNIMRHIAVCSNDGLNCAVLVTQDVHQ 518

  Fly   431 -----------------------------------------------------QQK--------- 433
                                                                 ||:         
  Fly   519 PRSLAVWPQKGLMFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLG 583

  Fly   434 CENTI---GSFRCTCVEGY--H-----LLEDQ-----------RSCALDSCTDLENPQLNRT--- 474
            ...|:   |:.|.|.::|.  |     :.|||           .:|...|..|......:||   
  Fly   584 SVQTVRPDGTGRRTVLDGMLKHPYGLAIFEDQLYWSDWATKSVHACHKFSGKDHRILAKDRTIYA 648

  Fly   475 -------------------RCAHEC-QDLPE-GSYRCVCPKGYELSEDQHSCLVQES-------- 510
                               .|:|.| ...|| |.:.|.||.|..|:.|...|::.|.        
  Fly   649 VHIYHPAKQPNSPHGCENATCSHLCLLAEPEIGGHSCACPDGMRLAPDHRRCMLMEKRQRLFIGL 713

  Fly   511 -----------------------PCSTEKGV-EKCSPGTCLASEDNTSFSCICPTGYRSEAF--- 548
                                   ||...:.| .:.:....:|..|........|..:.|...   
  Fly   714 GQVLLEIEHTAFGRHQVSKSYTLPCLINEMVYNRINGSLIIADNDQRLILEFQPESHESNVLVRS 778

  Fly   549 SCQDIDECAEDTHLCSHTC---------------------------QNTPGGYQCQCPEG----- 581
            :..::...|.| ||..:..                           |..|.|......||     
  Fly   779 NLGNVSALAFD-HLSRNLYWADTERAVIEVLSLQTRHRALIRFFPGQEVPIGLTVMPAEGYLYVV 842

  Fly   582 --------------------------------LNLVEEYT------------------------- 589
                                            :.||.:|.                         
  Fly   843 LKAKRHSHIDKIPLSGKGEQVHVFEDDLGDDDIKLVTDYETQTIFWSDSDLGRISYSNYRVPHSQ 907

  Fly   590 ----------CLA---------------------ENL---------------------------- 595
                      .||                     .|:                            
  Fly   908 IFRGKLRRPYSLAMVHHDLFWNELGTPRIYWTHKSNMGPRKVIDIMEKDDPAAIMPYVPVATPNG 972

  Fly   596 ---------------CEVNNNGCEQICLTARG---GVCACREGF-------RLSADGKSCE---D 632
                           |:..|.||..||: ..|   .:|.|..||       |...:...||   .
  Fly   973 IPLAASSPVGQESHPCQQQNGGCSHICV-GEGPYHSICLCPAGFVYRDAGNRTCVEALDCEFRCH 1036

  Fly   633 VDECLVNNGGC--QQVCRNLPGSYGC-----------------ICAAGYELLKLDGIRGYCFDID 678
            ..|||..|..|  ::.|.:......|                 .|.:|.:          |.|.:
  Fly  1037 SGECLTMNHRCNGRRDCVDNSDEMNCDEEHRRKPKVLCSPNQFACHSGEQ----------CVDKE 1091

  Fly   679 -ECSQR--THGCSDQMLCENLNGSYTCLCPPGYALGLDNHIVTSLNSSFITDSTSSETPSAHTCL 740
             .|..|  .|..||:..||..:.|..|..   :..|.||.  ..::||.:.|.|:.       |.
  Fly  1092 RRCDNRKDCHDHSDEQHCEKFDKSKKCHV---HQHGCDNG--KCVDSSLVCDGTND-------CG 1144

  Fly   741 D-IDE--CSLANGNCSHFCQNEPGGFQC-------------------------------ACP--- 768
            | .||  |. |...|      |||.|||                               :||   
  Fly  1145 DNSDELLCE-ATSRC------EPGMFQCGSGSCIAGSWECDGRIDCSDGSDEHDKCVHRSCPPDM 1202

  Fly   769 ----LGYALSEDMRTCQDIDECLDSNGQCSQLCLNQPGGFACA-----CETGFEL-TPDGFGCAD 823
                ||..|...: .|...::|.|.:.:.:....:.....:||     |.:..:: .|....|..
  Fly  1203 QRCLLGQCLDRSL-VCDGHNDCGDKSDELNCGTDSSTMNISCAEDQYQCTSNLKICLPSTVRCNG 1266

  Fly   824 IDEC--SQDYGNCSDICINLLGTHACACERGYELAKDKLSCLDVDECAGLLSGGCSHECINKAGT 886
            ..||  .:|..:|.|:|    ..:...|..|.|..:.:..|....:|..              |:
  Fly  1267 TTECPRGEDEADCGDVC----SIYEFKCRSGRECIRREFRCDGQKDCGD--------------GS 1313

  Fly   887 FECGCPL--GY-------ILNDDGRSCSPALVGCPPGTQRSADGCAPIE--CN--PGYTLGSDD- 937
            .|..|.|  |:       ..:...|||.|.|..|..|.      |..:.  ||  |..|.|.|: 
  Fly  1314 DELSCELEKGHHNQSQIQPWSTSSRSCRPHLFDCQDGE------CVDLSRVCNNFPDCTNGHDEG 1372

  Fly   938 -KCVDIDECQKQNGG--CSHRCSNTEGSFKCSCPPGYELDSDQKTCQDIDECDQDKTSCITGTCI 999
             ||.  ..|:..:|.  |.|:|..|.....|||..||.||:|||:|.||||| |::..| ...|.
  Fly  1373 PKCA--TACRSASGRQVCQHKCRATPAGAVCSCFDGYRLDADQKSCLDIDEC-QEQQPC-AQLCE 1433

  Fly  1000 NEIGGFRCE-FPKFPVLPEIPTASSLPESPKIELKTPKYPDFTELSNEIPENP 1051
            |.:||::|: ...|.:..:..:..||...     .|..:..|.|:.| :.|.|
  Fly  1434 NTLGGYQCQCHADFMLRQDRVSCKSLQSG-----ATLLFSSFNEVRN-LSEQP 1480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fracNP_001137905.1 FXa_inhibition 296..331 CDD:291342 15/34 (44%)
cEGF 396..415 CDD:289433 3/18 (17%)
FXa_inhibition 425..458 CDD:291342 16/136 (12%)
FXa_inhibition 476..505 CDD:291342 12/30 (40%)
vWFA <550..586 CDD:294047 10/99 (10%)
FXa_inhibition 596..630 CDD:291342 12/43 (28%)
FXa_inhibition 636..>664 CDD:291342 8/46 (17%)
EGF_CA 676..715 CDD:284955 12/41 (29%)
FXa_inhibition 745..780 CDD:291342 14/72 (19%)
FXa_inhibition 786..821 CDD:291342 6/40 (15%)
FXa_inhibition 827..862 CDD:291342 8/36 (22%)
FXa_inhibition 874..904 CDD:291342 6/38 (16%)
FXa_inhibition 945..980 CDD:291342 16/36 (44%)
CCP 1110..1170 CDD:153056
CCP 1183..1235 CDD:153056
DUF5011 1468..1536 CDD:295940
ylNP_996433.1 LDLa 90..124 CDD:238060
LDLa 131..166 CDD:238060
LDLa 184..216 CDD:238060 2/7 (29%)
LDLa 227..262 CDD:238060 11/42 (26%)
LDLa 271..302 CDD:238060 7/53 (13%)
FXa_inhibition 352..387 CDD:291342 15/34 (44%)
Ldl_recept_b 442..482 CDD:278487 9/45 (20%)
LY 466..508 CDD:214531 10/41 (24%)
Ldl_recept_b 529..569 CDD:278487 0/39 (0%)
LY 553..595 CDD:214531 4/41 (10%)
LY 596..637 CDD:214531 8/40 (20%)
FXa_inhibition 669..700 CDD:291342 12/30 (40%)
LY 774..815 CDD:214531 4/41 (10%)
LDLa 1032..1062 CDD:238060 7/29 (24%)
LDLa 1074..1109 CDD:238060 9/44 (20%)
LDLa 1118..1152 CDD:238060 12/45 (27%)
LDLa 1157..1189 CDD:197566 7/37 (19%)
LDLa 1198..1232 CDD:238060 8/34 (24%)
LDLa 1243..1279 CDD:238060 8/35 (23%)
LDLa 1283..1318 CDD:238060 8/52 (15%)
LDLa 1340..1371 CDD:197566 11/36 (31%)
FXa_inhibition 1388..1416 CDD:291342 14/27 (52%)
EGF_CA 1418..1452 CDD:214542 13/35 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24034
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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