DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment frac and dpy

DIOPT Version :9

Sequence 1:NP_001137905.1 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster
Sequence 2:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster


Alignment Length:1454 Identity:338/1454 - (23%)
Similarity:468/1454 - (32%) Gaps:595/1454 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 DNGGCAHICKRLLYPDENQPINKCDCREGYTLDPNDYASCLDIDECLE-SNGGCSEICENLPGEY 314
            :|..|.::....|          |.|::||..|..  ..|.|:|||.. .|.|.:.:|.|.||.|
  Fly   183 ENAECCNLPAHFL----------CKCKDGYEGDGE--VLCTDVDECRNPENCGPNALCTNTPGNY 235

  Fly   315 KCSCQEGYYLDES-GKSCVDINECANPELSSNCQGA-CENLPGSYRCVEPL----EENPEITEVV 373
            .|||.:||..:.. .:.|.|::||:.|.:..  .|| |.||.|||||..|.    :...|...|.
  Fly   236 TCSCPDGYVGNNPYREGCQDVDECSYPNVCG--PGAICTNLEGSYRCDCPPGYDGDGRSESGCVD 298

  Fly   374 ENPIEKTNEVPVNVSESQPAGKTCNSGFQLSADGT---------------DCQDINECEVDGPED 423
            ::...:|           |.|:..:.   |:.||:               .|:|::||..:.|..
  Fly   299 QDECART-----------PCGRNADC---LNTDGSFRCLCPDGYSGDPMNGCEDVDECATNNPCG 349

  Fly   424 LDNNAVCQQKCENTIGSFRCTCVEGYHLLEDQRSCALD--------------------------- 461
            |.      .:|.|..|||:|.|..|:.|..|..:..|.                           
  Fly   350 LG------AECVNLGGSFQCRCPSGFVLEHDPHADQLPQPLNTQQLGYGPGATDIAPYQRTSGAG 408

  Fly   462 -SCTDLE--NPQLNRTRCA--HECQDLPEGSYRCVCP-----KGYELSEDQHSCLVQESPCSTEK 516
             :|.|::  |......:|.  .:|.:.| |||||:||     :||...|:.:.|  |::||..  
  Fly   409 LACLDIDECNQPDGVAKCGTNAKCINFP-GSYRCLCPSGFQGQGYLHCENINEC--QDNPCGE-- 468

  Fly   517 GVEKCSPGTCLASEDNTSFSCICPTGYRSEAF-SCQDIDECAEDTHLCSH--TCQNTPGGYQCQC 578
                    ..:.::...||.|.|...|..:.| .|.|||||......|..  .|:||..||.|:|
  Fly   469 --------NAICTDTVGSFVCTCKPDYTGDPFRGCVDIDECTALDKPCGQHAVCENTVPGYNCKC 525

  Fly   579 PEGLNLVEEYTCLAEN-----LCEVN---NNGCEQICLTARGGVCACREGFRLSADGKSCEDVDE 635
            |:|.:...:.....|.     ||..|   .|..|  |:..:   |.|.:||  ...|.||.|:||
  Fly   526 PQGYDGKPDPKVACEQVDVNILCSSNFDCTNNAE--CIENQ---CFCLDGF--EPIGSSCVDIDE 583

  Fly   636 CLVNNGGC--QQVCRNLPGSYGCICAAGY---------------------ELLKLDGIRGY---- 673
            |..:...|  ...|.|.||||||.|.|||                     ...|.|....|    
  Fly   584 CRTHAEVCGPHAQCLNTPGSYGCECEAGYVGSPPRMACKQPCEDVRCGAHAYCKPDQNEAYCVCE 648

  Fly   674 -------------CFDIDECSQRTHG----CSDQMLCENLNGSYTCLCPPGYALGLDNHIVTSLN 721
                         |.|||||.. .||    |.....|.|..|.:||.||||:: | |.|      
  Fly   649 DGWTYNPSDVAAGCVDIDECDV-MHGPFGSCGQNATCTNSAGGFTCACPPGFS-G-DPH------ 704

  Fly   722 SSFITDSTSSETPSAHTCLDIDECSLANGNC--SHFCQNEPGG---------------------- 762
                           ..|:|:|||......|  ...|.|.|||                      
  Fly   705 ---------------SKCVDVDECRTGASKCGAGAECVNVPGGGYTCRCPGNTIADPDPSVRCVP 754

  Fly   763 ------------------------------------------------------FQCACPLGYAL 773
                                                                  .||.|..||..
  Fly   755 IVSCSANEDCPGNSICDATKRCLCPEPNIGNDCRHPCEALNCGAHAQCMLANGQAQCLCAPGYTG 819

  Fly   774 SEDMR-TCQDIDECLDSNGQCSQ--LCLNQPGGFACACETGFE--------LTPDGFGCADIDEC 827
            :..:. .|.|||||  ....|::  :|.|..||:.|.|..|..        :|....||:|.:.|
  Fly   820 NSALAGGCNDIDEC--RANPCAEKAICSNTAGGYLCQCPGGSSGDPYREGCITSKTVGCSDANPC 882

  Fly   828 SQDYGNCSDICI--NLLGTHACACERGYELAKDKLSCLDVDECA---GLLSGGCSHECINKAGTF 887
            :     ..:.|:  :..|...|.|.:|||...:...|.|||||:   |..:.|.:..|.|..|::
  Fly   883 A-----TGETCVQDSYTGNSVCICRQGYERNSENGQCQDVDECSVQRGKPACGLNALCKNLPGSY 942

  Fly   888 ECGCPLGY---------ILNDDGRSC-SP-ALVG-------------CPPGTQ--RSADGCAPIE 926
            ||.||.|:         |.|.....| || .|||             ||.|.:  ..|.|.:...
  Fly   943 ECRCPQGHNGNPFIMCEICNTPECQCQSPYKLVGNSCVLSGCSSGQACPSGAECISIAGGVSYCA 1007

  Fly   927 CNPGYTLGSDDKCVDIDECQKQNGG-CSH--RCSNTEGSFKCSCPPGYELDS-------DQKTC- 980
            |..||....|..|||:|||:::... |:.  :|.|..||:.|.||.||:.|:       .|:.| 
  Fly  1008 CPKGYQTQPDGSCVDVDECEERGAQLCAFGAQCVNKPGSYSCHCPEGYQGDAYNGLCALAQRKCA 1072

  Fly   981 ---------------------------QDIDEC-------------------------------- 986
                                       ||.::|                                
  Fly  1073 ADRECAANEKCIQPGECVCPPPYFLDPQDNNKCKSPCERFPCGINAKCTPSDPPQCMCEAGFKGD 1137

  Fly   987 ------DQDKTS---CITGT-CINEIGGFRCEFPKFPVLPEIPTASSLPESPKIELKTPKYPDFT 1041
                  |:|:.|   |..|. |:|:.||::|..||                           |:|
  Fly  1138 PLLGCTDEDECSHLPCAYGAYCVNKKGGYQCVCPK---------------------------DYT 1175

  Fly  1042 ELSNEIPENP-KKPAEFDYPEPKFPSLPKWEGLPKLPPLADIPTSKAPVPLRPEVPKSLWVNQLQ 1105
                   .:| |....|:...||...|...:....|..|.....|..         .||      
  Fly  1176 -------GDPYKSGCIFESGTPKSKCLSNDDCASNLACLEGSCVSPC---------SSL------ 1218

  Fly  1106 PRDLCPRFQAPRNGKSHCNRYRHKQKLFYYSRCRISCNSGYILQGPE--IKSCD----ANGIW-- 1162
               ||       ...::|...:|..    :.|||:    ||:..|..  :..|.    .:|..  
  Fly  1219 ---LC-------GSNAYCETEQHAG----WCRCRV----GYVKNGDGDCVSQCQDVICGDGALCI 1265

  Fly  1163 ---EGPETKCVAINQPRAQ----------SPGICPALKPAQ--------------NGVI--LPAS 1198
               |||..||     |:.|          |...|.|.:|..              .||:  :.|:
  Fly  1266 PTSEGPTCKC-----PQGQLGNPFPGGSCSTDQCSAARPCGERQICINGRCKERCEGVVCGIGAT 1325

  Fly  1199 CTQG-------PSRFGD---VC--------------------------RLQCNAGFVSTGSLLTA 1227
            |.:.       |:..|:   :|                          |..||.|  :.|:....
  Fly  1326 CDRNNGKCICEPNFVGNPDLICMPPIEQAKCSPGCGENAHCEYGLGQSRCACNPG--TFGNPYEG 1388

  Fly  1228 C-----MMLQGWSFGADLNCQPFGN--------GLLGNQLSPMWNSPKTVTPHQIQNVEQIRPYI 1279
            |     .:.|..|.|.:..|:..||        |..||                        |||
  Fly  1389 CGAQSKNVCQPNSCGPNAECRAVGNHISCLCPQGFSGN------------------------PYI 1429

  Fly  1280 NCPE-----------NVVILLHAG 1292
            .|.:           |...|..||
  Fly  1430 GCQDVDECANKPCGLNAACLNRAG 1453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fracNP_001137905.1 FXa_inhibition 296..331 CDD:291342 13/36 (36%)
cEGF 396..415 CDD:289433 5/33 (15%)
FXa_inhibition 425..458 CDD:291342 10/32 (31%)
FXa_inhibition 476..505 CDD:291342 13/35 (37%)
vWFA <550..586 CDD:294047 16/37 (43%)
FXa_inhibition 596..630 CDD:291342 10/36 (28%)
FXa_inhibition 636..>664 CDD:291342 14/50 (28%)
EGF_CA 676..715 CDD:284955 19/42 (45%)
FXa_inhibition 745..780 CDD:291342 12/113 (11%)
FXa_inhibition 786..821 CDD:291342 10/44 (23%)
FXa_inhibition 827..862 CDD:291342 8/36 (22%)
FXa_inhibition 874..904 CDD:291342 11/38 (29%)
FXa_inhibition 945..980 CDD:291342 13/44 (30%)
CCP 1110..1170 CDD:153056 15/70 (21%)
CCP 1183..1235 CDD:153056 17/108 (16%)
DUF5011 1468..1536 CDD:295940
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011 16/34 (47%)
EGF_CA 255..>286 CDD:214542 15/32 (47%)
EGF_CA 298..331 CDD:238011 6/46 (13%)
EGF_CA 338..373 CDD:238011 14/40 (35%)
EGF_CA 413..456 CDD:238011 14/43 (33%)
EGF_CA 457..490 CDD:238011 9/44 (20%)
EGF_CA 497..>529 CDD:214542 14/31 (45%)
EGF_CA 580..>612 CDD:214542 15/31 (48%)
EGF_3 676..702 CDD:289699 11/27 (41%)
EGF_CA 1022..1056 CDD:214542 13/33 (39%)
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BA2W
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D4721at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.820

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