DRSC/TRiP Functional Genomics Resources

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Protein Alignment frac and Vwce

DIOPT Version :10

Sequence 1:NP_648137.3 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster
Sequence 2:NP_001258240.1 Gene:Vwce / 309209 RGDID:1309910 Length:930 Species:Rattus norvegicus


Alignment Length:1029 Identity:233/1029 - (22%)
Similarity:324/1029 - (31%) Gaps:437/1029 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 PINKCDCREGYTLDPNDYASCLDIDE---CLESNGGCSEICENLPGEYKC-------SCQE---- 320
            |:....|..|..:.|| ..||.|.::   |.|::|.|        |||.|       .|||    
  Rat    69 PLCSFGCGRGICIAPN-VCSCQDGEQGATCPEAHGSC--------GEYGCDLTCNHGGCQEVARV 124

  Fly   321 ---GYYLDES--GKSCVDINECANPELSSNCQGACENLPGSYRCVEPLEENPEITEVVENPIEKT 380
               |:.:.|:  |..|.||:||    |||:|:|.|.|..|.:.|                     
  Rat   125 CPVGFLMTETAVGIRCADIDEC----LSSSCEGHCVNTEGGFVC--------------------- 164

  Fly   381 NEVPVNVSESQPAGKTCNSGFQLSADGTDCQDINECEVDGPEDLDNNAVCQQKCENTIGSFRCTC 445
                           .|..|.|||||...|||.:|| :..|        |||:|:|:|||::|:|
  Rat   165 ---------------ECGPGMQLSADRHSCQDTDEC-LGTP--------CQQRCKNSIGSYKCSC 205

  Fly   446 VEGYHLLEDQRSCA-LDSCTDLENPQLNRTRCAHECQDLPEGSYRCVCPKGYELSEDQHSC---- 505
            ..|:||..::.||. ::.|   ..|| .|..|.|.|.: ..||:.|.|..|:.|..|:.||    
  Rat   206 RAGFHLHGNRHSCIDINEC---RRPQ-ERRICHHTCHN-TVGSFLCTCRPGFRLQADRVSCEAFP 265

  Fly   506 --------LVQ--ESPCS-----TEKGVEKCSPG------------------------------- 524
                    ::|  :.|..     .|.|....|||                               
  Rat   266 KAVLAPSAILQPRQQPAKMSLLLPEAGRPALSPGHSPPPGAPGYPTGVRTISQPSATQAPPTFFA 330

  Fly   525 TCLASEDNTSFSCI------------------CPTGYRSEAF-----SCQDIDECAEDTHLCSHT 566
            |.|.|....|.|.:                  .|.|..|...     ||:.:....|     |.:
  Rat   331 TQLTSTPLPSSSPLGTLGPPSLLHREVVGTPSSPRGPESPKLGAGPSSCRHLGATYE-----SGS 390

  Fly   567 CQNTPGGYQCQCPEGLNLVEEYTCLAENLCEVNNNGCEQICLTARGGVC-ACREGFR---LSADG 627
            ....||..||.|.:|     |.|| .|..|:   :.|......:.||.| :|...|.   :.|:|
  Rat   391 RWRQPGCSQCLCQDG-----EVTC-GEVRCD---STCSHPIPPSEGGCCPSCTGCFHSGVIRAEG 446

  Fly   628 KSCEDVDECLVNNGGCQQVCRNLPGSYGCICAAGYELLKLDGIRGYCFDIDECSQRTHGCSDQML 692
            ......:|      .| .||..|.|:..||.                   .||.......|.|..
  Rat   447 DVFSPPEE------NC-TVCVCLAGNVSCIS-------------------PECPPGPCKASPQSD 485

  Fly   693 CENLNGSYTCLCPPGYALGLDNHIVTSLNSSFITDST--SSETPSAHTCLDIDECSLANGNCSHF 755
            |        |.|.||...         .:..:.||..  |.......||:               
  Rat   486 C--------CTCAPGRCY---------FHGRWYTDGAVFSGGGDDCTTCV--------------- 518

  Fly   756 CQNEPGGFQCA--------CPLGYALSEDMRTCQDIDECLDSNGQCSQLCLNQPGGFACACETGF 812
            |||  |..:|:        ||.              :|.|...|||              |.|..
  Rat   519 CQN--GEVECSFTPCPELECPR--------------EEWLLGPGQC--------------CFTCR 553

  Fly   813 ELTPDGFGCADIDECSQDY-----GNCSDICINLLGTHACACERGYELAKDKLSCLD-------- 864
            |.||. .||: :|:...::     .:..|.|      ..|.|:....::..:..|:|        
  Rat   554 EPTPT-TGCS-LDDNGVEFPIGQIWSPGDPC------ELCVCQADGSVSCKRTDCVDSCPHPIRV 610

  Fly   865 VDECAGLLSGGCSH----------------ECINKAGTFECGCPLGYILNDDGRSCSPALVGCPP 913
            ..:|....|.||::                .|::      |.|.||.:      :|||  |.|  
  Rat   611 PGQCCPDCSAGCTYTGRIFYNNETFPSVLDPCLS------CICLLGSV------ACSP--VDC-- 659

  Fly   914 GTQRSADGCAPIECNPGYTLGSDDKCVDIDECQKQNGGCSHRCSNTEG---------------SF 963
                      ||.|.  |....|.:|..:         | |.| |.||               ..
  Rat   660 ----------PITCT--YPFHPDGECCPV---------C-HDC-NFEGRKVVNGQVFTLDDEPCT 701

  Fly   964 KCSCPPGYELDSDQKTCQDIDECDQDKTSCITGTCINEIGGFRCEFP------------------ 1010
            :|.|..| |:..:...||.:         |...:|.:.:      ||                  
  Rat   702 RCVCQLG-EVSCETVPCQPV---------CTDSSCPDSL------FPQEEKQQPSPHGDLAKAAR 750

  Fly  1011 ------KFPV----LPEIPTASSLPESP-----KIELKT--------PKYPDFTELSNEIPENPK 1052
                  :.||    .|..|:||  |..|     |:.|:|        ...|...:.|:.:..:|:
  Rat   751 NPRGDTEVPVNCSSCPGPPSAS--PARPTSQLLKLLLRTNLSNVQSASPGPPVAQASSSLLLDPQ 813

  Fly  1053 -----KPAEFDYPEPKFPS--LPKWEGLPKLPP-LADIPTSKAPVPLRPEVPKS 1098
                 ||..   ..|..||  .|...|||.||| :...|:|    .:.||...|
  Rat   814 GTVLGKPGA---SRPSEPSGGAPVSPGLPTLPPAILGTPSS----TVTPESSSS 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fracNP_648137.3 FXa_inhibition 296..331 CDD:464251 14/50 (28%)
cEGF 396..415 CDD:463661 10/18 (56%)
FXa_inhibition 425..458 CDD:464251 13/32 (41%)
FXa_inhibition 476..505 CDD:464251 10/28 (36%)
EGF_CA 552..>581 CDD:214542 7/28 (25%)
FXa_inhibition 596..630 CDD:464251 9/37 (24%)
FXa_inhibition 636..>664 CDD:464251 7/27 (26%)
EGF_CA 676..711 CDD:214542 9/34 (26%)
FXa_inhibition 745..780 CDD:464251 7/42 (17%)
FXa_inhibition 786..821 CDD:464251 9/34 (26%)
vWFA <821..861 CDD:469594 6/44 (14%)
FXa_inhibition 874..904 CDD:464251 7/45 (16%)
FXa_inhibition 945..980 CDD:464251 10/49 (20%)
PTZ00449 <1017..>1098 CDD:185628 27/101 (27%)
CCP 1110..1170 CDD:153056
CCP 1183..1235 CDD:153056
HYR 1468..1536 CDD:460572
VwceNP_001258240.1 EGF_CA 142..180 CDD:214542 20/77 (26%)
FXa_inhibition 190..218 CDD:464251 13/27 (48%)
EGF_CA 220..262 CDD:214542 15/46 (33%)
PHA03247 <263..377 CDD:223021 15/113 (13%)
VWC 379..433 CDD:450195 18/67 (27%)
VWC 436..>479 CDD:450195 13/68 (19%)
VWC 494..552 CDD:450195 18/111 (16%)
VWC 565..618 CDD:214564 7/58 (12%)
VWC 622..677 CDD:450195 17/91 (19%)
PHA03247 <741..919 CDD:223021 31/129 (24%)
Blue background indicates that the domain is not in the aligned region.

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