DRSC/TRiP Functional Genomics Resources

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Protein Alignment frac and Cd248

DIOPT Version :9

Sequence 1:NP_001137905.1 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster
Sequence 2:NP_001099795.1 Gene:Cd248 / 293669 RGDID:1310404 Length:764 Species:Rattus norvegicus


Alignment Length:629 Identity:145/629 - (23%)
Similarity:193/629 - (30%) Gaps:260/629 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   732 ETPSAHTCLDIDECSLA-NGNCSHFCQNEPGGFQCACP-----LGYA-----------LSEDMR- 778
            |....|..|: ..|:|| :|   :.||   .||:.|||     :|.|           :|.:.. 
  Rat   135 EASGEHRWLE-GSCTLAVDG---YLCQ---FGFEGACPALPLEVGQAGPAIYTTPFNLVSSEFEW 192

  Fly   779 ---------TCQDIDECLDSNGQCSQLCLNQPGGFACACETGFELTPDGFGCADIDECSQDYGNC 834
                     .||       :....|.||:.||.|.....:|| .|.| |.|      |..|.|.|
  Rat   193 LPFGSVAAVQCQ-------AGRGTSLLCVKQPSGGVGWSQTG-PLCP-GTG------CGPDNGGC 242

  Fly   835 SDICINLL-GTHACACERGYELAKDKLSCLDVDECAGLLSGGCSHECINKAGTFECGCPLGYILN 898
            ...|:..| |..:|.|..|:.||.|..||  .|.||   ...|..:|       |.|.|.||   
  Rat   243 EHECVEELDGGMSCRCSEGFRLAADGHSC--EDPCA---QAPCEQQC-------EPGGPQGY--- 292

  Fly   899 DDGRSCSPALVGCPPGTQRSADGCAPIECNPGYTLGSDD--KCVDIDECQKQNGGCSHRCSNTEG 961
                ||                     .|..|:....|:  :|||.||||.. |.|...|.|..|
  Rat   293 ----SC---------------------HCRLGFRPAEDEPHRCVDTDECQIA-GVCQQMCVNYVG 331

  Fly   962 SFKCSCPPGYELDSDQKTC-----------QDI----------DECDQDKTSCITGTCINEIG-- 1003
            .|:|.|..|:||::|..:|           ||:          .|.:::......||...|.|  
  Rat   332 GFECYCREGHELEADGISCSPAGAMGAQASQDLRDELLDDGEEGEDEEEPWEDFDGTWTEEQGTL 396

  Fly  1004 ------------GFRCEFP------KFPVLPEIPTASSLPESP------------KIELKTPKYP 1038
                        .:|..||      :..:.|..|...|.|..|            .|....|..|
  Rat   397 WMAPTHPPDFGLPYRPNFPQDGEPQRLHLEPTWPPPLSAPRGPYHSSVVSATRPMVISATRPTQP 461

  Fly  1039 DFTELS----NEIPENPKKP------------AEFDYPEPK--FPSLP--KWEGL---------- 1073
            ...:.|    ..:|.||..|            .|...|:.|  :|.||  ...|:          
  Rat   462 SARKTSVISATHLPLNPVHPPALAPTTPPAVLPEHQIPKIKASYPDLPFGHKPGITSATHPAQPP 526

  Fly  1074 PKLPPLAD------IPTSKAPV-----------------------------PLRPEVP------K 1097
            |..||:..      .|..:||:                             ||.|:||      .
  Rat   527 PHQPPIISTKYPQVFPPQQAPMSPDTHTITNLPLIPSHLDPGDTTSQAGHHPLLPDVPGIRTQAP 591

  Fly  1098 SLWVNQLQP-----------------RDLCPRFQAPRNGKSHCNRYRHKQKLFYYSRCRISCNSG 1145
            .:.|:.|||                 .:..|.|.:|...:|..|:.........|||        
  Rat   592 QVSVSALQPSLPTNSRSSVHEPPVPTANQPPAFPSPLPPQSPINQTSSISPTHSYSR-------- 648

  Fly  1146 YILQGPEIKSCDANGIWEG-PETKCVAINQPRAQSPGICPALKP 1188
                .|::..       || |..|.|    ||..|  :.|...|
  Rat   649 ----APQVPR-------EGAPSPKSV----PRLHS--VAPTAAP 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fracNP_001137905.1 FXa_inhibition 296..331 CDD:291342
cEGF 396..415 CDD:289433
FXa_inhibition 425..458 CDD:291342
FXa_inhibition 476..505 CDD:291342
vWFA <550..586 CDD:294047
FXa_inhibition 596..630 CDD:291342
FXa_inhibition 636..>664 CDD:291342
EGF_CA 676..715 CDD:284955
FXa_inhibition 745..780 CDD:291342 14/61 (23%)
FXa_inhibition 786..821 CDD:291342 11/34 (32%)
FXa_inhibition 827..862 CDD:291342 13/35 (37%)
FXa_inhibition 874..904 CDD:291342 7/29 (24%)
FXa_inhibition 945..980 CDD:291342 14/34 (41%)
CCP 1110..1170 CDD:153056 13/60 (22%)
CCP 1183..1235 CDD:153056 2/6 (33%)
DUF5011 1468..1536 CDD:295940
Cd248NP_001099795.1 CLECT_thrombomodulin_like 29..160 CDD:153070 9/31 (29%)
FXa_inhibition 235..271 CDD:291342 13/35 (37%)
EGF_CA 312..350 CDD:214542 17/38 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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