DRSC/TRiP Functional Genomics Resources

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Protein Alignment frac and Cd248

DIOPT Version :10

Sequence 1:NP_648137.3 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster
Sequence 2:NP_001099795.1 Gene:Cd248 / 293669 RGDID:1310404 Length:764 Species:Rattus norvegicus


Alignment Length:629 Identity:145/629 - (23%)
Similarity:193/629 - (30%) Gaps:260/629 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   732 ETPSAHTCLDIDECSLA-NGNCSHFCQNEPGGFQCACP-----LGYA-----------LSEDMR- 778
            |....|..|: ..|:|| :|   :.||   .||:.|||     :|.|           :|.:.. 
  Rat   135 EASGEHRWLE-GSCTLAVDG---YLCQ---FGFEGACPALPLEVGQAGPAIYTTPFNLVSSEFEW 192

  Fly   779 ---------TCQDIDECLDSNGQCSQLCLNQPGGFACACETGFELTPDGFGCADIDECSQDYGNC 834
                     .||       :....|.||:.||.|.....:|| .|.| |.|      |..|.|.|
  Rat   193 LPFGSVAAVQCQ-------AGRGTSLLCVKQPSGGVGWSQTG-PLCP-GTG------CGPDNGGC 242

  Fly   835 SDICINLL-GTHACACERGYELAKDKLSCLDVDECAGLLSGGCSHECINKAGTFECGCPLGYILN 898
            ...|:..| |..:|.|..|:.||.|..||  .|.||   ...|..:|       |.|.|.||   
  Rat   243 EHECVEELDGGMSCRCSEGFRLAADGHSC--EDPCA---QAPCEQQC-------EPGGPQGY--- 292

  Fly   899 DDGRSCSPALVGCPPGTQRSADGCAPIECNPGYTLGSDD--KCVDIDECQKQNGGCSHRCSNTEG 961
                ||                     .|..|:....|:  :|||.||||.. |.|...|.|..|
  Rat   293 ----SC---------------------HCRLGFRPAEDEPHRCVDTDECQIA-GVCQQMCVNYVG 331

  Fly   962 SFKCSCPPGYELDSDQKTC-----------QDI----------DECDQDKTSCITGTCINEIG-- 1003
            .|:|.|..|:||::|..:|           ||:          .|.:::......||...|.|  
  Rat   332 GFECYCREGHELEADGISCSPAGAMGAQASQDLRDELLDDGEEGEDEEEPWEDFDGTWTEEQGTL 396

  Fly  1004 ------------GFRCEFP------KFPVLPEIPTASSLPESP------------KIELKTPKYP 1038
                        .:|..||      :..:.|..|...|.|..|            .|....|..|
  Rat   397 WMAPTHPPDFGLPYRPNFPQDGEPQRLHLEPTWPPPLSAPRGPYHSSVVSATRPMVISATRPTQP 461

  Fly  1039 DFTELS----NEIPENPKKP------------AEFDYPEPK--FPSLP--KWEGL---------- 1073
            ...:.|    ..:|.||..|            .|...|:.|  :|.||  ...|:          
  Rat   462 SARKTSVISATHLPLNPVHPPALAPTTPPAVLPEHQIPKIKASYPDLPFGHKPGITSATHPAQPP 526

  Fly  1074 PKLPPLAD------IPTSKAPV-----------------------------PLRPEVP------K 1097
            |..||:..      .|..:||:                             ||.|:||      .
  Rat   527 PHQPPIISTKYPQVFPPQQAPMSPDTHTITNLPLIPSHLDPGDTTSQAGHHPLLPDVPGIRTQAP 591

  Fly  1098 SLWVNQLQP-----------------RDLCPRFQAPRNGKSHCNRYRHKQKLFYYSRCRISCNSG 1145
            .:.|:.|||                 .:..|.|.:|...:|..|:.........|||        
  Rat   592 QVSVSALQPSLPTNSRSSVHEPPVPTANQPPAFPSPLPPQSPINQTSSISPTHSYSR-------- 648

  Fly  1146 YILQGPEIKSCDANGIWEG-PETKCVAINQPRAQSPGICPALKP 1188
                .|::..       || |..|.|    ||..|  :.|...|
  Rat   649 ----APQVPR-------EGAPSPKSV----PRLHS--VAPTAAP 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fracNP_648137.3 FXa_inhibition 296..331 CDD:464251
cEGF 396..415 CDD:463661
FXa_inhibition 425..458 CDD:464251
FXa_inhibition 476..505 CDD:464251
EGF_CA 552..>581 CDD:214542
FXa_inhibition 596..630 CDD:464251
FXa_inhibition 636..>664 CDD:464251
EGF_CA 676..711 CDD:214542
FXa_inhibition 745..780 CDD:464251 14/61 (23%)
FXa_inhibition 786..821 CDD:464251 11/34 (32%)
vWFA <821..861 CDD:469594 13/40 (33%)
FXa_inhibition 874..904 CDD:464251 7/29 (24%)
FXa_inhibition 945..980 CDD:464251 14/34 (41%)
PTZ00449 <1017..>1098 CDD:185628 30/163 (18%)
CCP 1110..1170 CDD:153056 13/60 (22%)
CCP 1183..1235 CDD:153056 2/6 (33%)
HYR 1468..1536 CDD:460572
Cd248NP_001099795.1 CLECT_thrombomodulin_like 29..160 CDD:153070 9/31 (29%)
FXa_inhibition 235..271 CDD:464251 13/35 (37%)
EGF_CA 312..350 CDD:214542 17/38 (45%)
PHA03247 <399..665 CDD:223021 52/288 (18%)
Blue background indicates that the domain is not in the aligned region.

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