DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment frac and Fbln5

DIOPT Version :9

Sequence 1:NP_001137905.1 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster
Sequence 2:XP_006240521.1 Gene:Fbln5 / 29158 RGDID:2594 Length:461 Species:Rattus norvegicus


Alignment Length:396 Identity:127/396 - (32%)
Similarity:172/396 - (43%) Gaps:92/396 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   639 NNGGCQQVCRNL-------------PGSYGCICAAGYELLKLDGIRGYCFDIDECSQRTHGCSDQ 690
            |:|.|:|  |.:             ||:....|..|::   ||...|.|.|||||......|...
  Rat    10 NSGHCRQ--RRMILTVTILALWLPHPGNAQQQCTNGFD---LDRQTGQCLDIDECRTIPEACRGD 69

  Fly   691 MLCENLNGSYTCL--CPPGYALGLDNHIVTSLN------------SSFITDST------SSETPS 735
            |:|.|.||.|.|:  ..|.|.....|...||.:            |::.|.|.      ..:...
  Rat    70 MMCVNQNGGYLCIPRTNPVYRGPYSNPYSTSYSGPYPAAAPPVPASNYPTISRPLVCRFGYQMDE 134

  Fly   736 AHTCLDIDECSLANGNC--SHFCQNEPGGFQCACPLGYALSEDMRTCQDIDECLDSNGQCSQLCL 798
            .:.|:|:|||:..:..|  :..|.|..||:.|:|..||.|.|..  |.|||||  ..|.|.|||.
  Rat   135 GNQCVDVDECATDSHQCNPTQICINTEGGYTCSCTDGYWLLEGQ--CLDIDEC--RYGYCQQLCA 195

  Fly   799 NQPGGFACACETGFELTPDGFGCADIDECSQDYGNCSDICINLLGTHACACERGYELAKDKLSCL 863
            |.||.::|.|..||.|..||..|.|::||..: ..|...|:|..|:..|.|:.||||.:|.:.|.
  Rat   196 NVPGSYSCTCNPGFTLNDDGRSCQDVNECETE-NPCVQTCVNTYGSFICRCDPGYELEEDGIHCS 259

  Fly   864 DVDECAGLLSGGCSHECINKAGTFECGCPLGYILNDDGRSCSPALVGCPPGTQRSADGCAPIECN 928
            |:|||: .....|.|||:|:.|::.|.||.||:|.:|.|||.                       
  Rat   260 DMDECS-FSEFLCQHECVNQPGSYFCSCPPGYVLLEDNRSCQ----------------------- 300

  Fly   929 PGYTLGSDDKCVDIDECQKQNGGCS--HRCSNTEGSFKC----SCPPGYELDSDQKTCQDIDECD 987
                        ||:||:.:|..|:  ..|.|.:|.|||    .|...|.|..|.: |.    |.
  Rat   301 ------------DINECEHRNHTCTPLQTCYNLQGGFKCIDPIVCEEPYLLIGDNR-CM----CP 348

  Fly   988 QDKTSC 993
            .:.|.|
  Rat   349 AENTGC 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fracNP_001137905.1 FXa_inhibition 296..331 CDD:291342
cEGF 396..415 CDD:289433
FXa_inhibition 425..458 CDD:291342
FXa_inhibition 476..505 CDD:291342
vWFA <550..586 CDD:294047
FXa_inhibition 596..630 CDD:291342
FXa_inhibition 636..>664 CDD:291342 9/37 (24%)
EGF_CA 676..715 CDD:284955 15/40 (38%)
FXa_inhibition 745..780 CDD:291342 12/36 (33%)
FXa_inhibition 786..821 CDD:291342 16/34 (47%)
FXa_inhibition 827..862 CDD:291342 12/34 (35%)
FXa_inhibition 874..904 CDD:291342 14/29 (48%)
FXa_inhibition 945..980 CDD:291342 13/40 (33%)
CCP 1110..1170 CDD:153056
CCP 1183..1235 CDD:153056
DUF5011 1468..1536 CDD:295940
Fbln5XP_006240521.1 vWFA <134..178 CDD:294047 16/43 (37%)
cEGF 200..223 CDD:289433 9/22 (41%)
EGF_CA 220..258 CDD:214542 14/38 (37%)
FXa_inhibition 271..299 CDD:291342 14/27 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24034
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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