DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment frac and Vwa2

DIOPT Version :9

Sequence 1:NP_001137905.1 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster
Sequence 2:NP_766428.2 Gene:Vwa2 / 240675 MGIID:2684334 Length:791 Species:Mus musculus


Alignment Length:222 Identity:50/222 - (22%)
Similarity:80/222 - (36%) Gaps:67/222 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 EPLEENPEITEVVENPIEKTNEVPVNVSESQPAGKTCNSGFQLSADGTDCQ-DINECE---VDGP 421
            ||.:.:..:.|.||   :.||.:...:|.|    ..|.     :|| .||: :.:.||   ::..
Mouse   198 EPKDRHVLLAEQVE---DATNGLLSTLSSS----ALCT-----TAD-PDCRVEPHPCERRTLETV 249

  Fly   422 EDLDNNAVCQQKCENTIGSFRCTCVEGYHLLEDQRSCALDSCTDLENPQLNRTRCAHECQDLPEG 486
            .:|..||:|.:      ||.:.                 |:...|..|..:..|.   .|..|..
Mouse   250 RELAGNALCWR------GSRQA-----------------DTVLALPCPFYSWKRV---FQTHPAN 288

  Fly   487 SYRCVCPKGYELSEDQHSCLVQESPCSTEKGVEKC-SPGTCLASEDNTSFSCICPTGYRSEAFSC 550
            .||.:||                .||.:    :.| :.|||: .|....:.|:||..:..|....
Mouse   289 CYRTICP----------------GPCDS----QPCQNGGTCI-PEGVDRYHCLCPLAFGGEVNCA 332

  Fly   551 QDID-ECAEDT-HLCSHTCQNTPGGYQ 575
            ..:. ||..|. .|...:...|.||::
Mouse   333 PKLSLECRIDVLFLLDSSAGTTLGGFR 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fracNP_001137905.1 FXa_inhibition 296..331 CDD:291342
cEGF 396..415 CDD:289433 5/19 (26%)
FXa_inhibition 425..458 CDD:291342 5/32 (16%)
FXa_inhibition 476..505 CDD:291342 6/28 (21%)
vWFA <550..586 CDD:294047 7/28 (25%)
FXa_inhibition 596..630 CDD:291342
FXa_inhibition 636..>664 CDD:291342
EGF_CA 676..715 CDD:284955
FXa_inhibition 745..780 CDD:291342
FXa_inhibition 786..821 CDD:291342
FXa_inhibition 827..862 CDD:291342
FXa_inhibition 874..904 CDD:291342
FXa_inhibition 945..980 CDD:291342
CCP 1110..1170 CDD:153056
CCP 1183..1235 CDD:153056
DUF5011 1468..1536 CDD:295940
Vwa2NP_766428.2 vWA_collagen 50..204 CDD:238749 2/5 (40%)
EGF 298..328 CDD:278437 9/34 (26%)
VWA 342..515 CDD:278519 5/18 (28%)
vWFA 530..687 CDD:294047
EGF_CA 712..747 CDD:238011
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 762..791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.