DRSC/TRiP Functional Genomics Resources

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Protein Alignment frac and Matn3

DIOPT Version :9

Sequence 1:NP_001137905.1 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster
Sequence 2:NP_034900.4 Gene:Matn3 / 17182 MGIID:1328350 Length:481 Species:Mus musculus


Alignment Length:250 Identity:83/250 - (33%)
Similarity:115/250 - (46%) Gaps:29/250 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   708 YALGLDNHIVTSLNSS----------FITDSTSSETPSA---HTCLDIDECSLANGNCSHFCQNE 759
            ||:|:|...:.||...          ::......|..||   .|...:|:|.|....|.|.|.::
Mouse   213 YAVGVDRADMESLKMMASKPLEEHVFYVETYGVIEKLSARFQETFCALDQCMLGTHQCQHVCVSD 277

  Fly   760 -PGGFQCACPLGYALSEDMRTCQDIDECLDSNGQCSQLCLN-QPGGFACACETGFELTPDGFGCA 822
             .|...|.|..||.|:.|.:||..||:|..|...|.|:|:| :.|.:.|.|..|:.|..|...||
Mouse   278 GDGKHHCECSQGYTLNADGKTCSAIDKCALSTHGCEQICVNDRNGSYHCECYGGYALNADRRTCA 342

  Fly   823 DIDECSQDYGNCSDICIN-LLGTHACACERGYELAKDKLSCLDVDECAGLLSGGCSHECINK-AG 885
            .:|:|:.....|..||:| ..|:|.|.|..||.|..||.:|...::|| |.:.||.|.|::. |.
Mouse   343 ALDKCASGTHGCQHICVNDGAGSHHCECFEGYTLNADKKTCSVRNKCA-LGTHGCQHICVSDGAV 406

  Fly   886 TFECGCPLGYILNDDGRSCSPALVGCPPGTQRSADGCAPIE--CNPGYTLGSDDK 938
            .:.|.|..||.||||.::||..         ..|.....||  |..|.||...:|
Mouse   407 AYHCDCFPGYTLNDDKKTCSDI---------EEARSLISIEDACGCGATLAFQEK 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fracNP_001137905.1 FXa_inhibition 296..331 CDD:291342
cEGF 396..415 CDD:289433
FXa_inhibition 425..458 CDD:291342
FXa_inhibition 476..505 CDD:291342
vWFA <550..586 CDD:294047
FXa_inhibition 596..630 CDD:291342
FXa_inhibition 636..>664 CDD:291342
EGF_CA 676..715 CDD:284955 4/6 (67%)
FXa_inhibition 745..780 CDD:291342 12/35 (34%)
FXa_inhibition 786..821 CDD:291342 12/35 (34%)
FXa_inhibition 827..862 CDD:291342 14/35 (40%)
FXa_inhibition 874..904 CDD:291342 13/30 (43%)
FXa_inhibition 945..980 CDD:291342
CCP 1110..1170 CDD:153056
CCP 1183..1235 CDD:153056
DUF5011 1468..1536 CDD:295940
Matn3NP_034900.4 vWFA 75..298 CDD:294047 23/84 (27%)
FXa_inhibition 305..341 CDD:291342 12/35 (34%)
FXa_inhibition 347..383 CDD:291342 14/35 (40%)
FXa_inhibition 389..425 CDD:291342 16/36 (44%)
Matrilin_ccoil 438..478 CDD:287378 5/14 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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