DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment frac and ltbp3

DIOPT Version :9

Sequence 1:NP_001137905.1 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster
Sequence 2:XP_002935409.2 Gene:ltbp3 / 100490885 XenbaseID:XB-GENE-6050660 Length:1146 Species:Xenopus tropicalis


Alignment Length:1132 Identity:269/1132 - (23%)
Similarity:369/1132 - (32%) Gaps:423/1132 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 NDDHANEVVESEP--------ALAETETENEVLENETPLKAEVQTDVLNSSNASVKVTNDPYEPT 242
            |...|.|...:||        |:.....|:|....||.:.....|..|...:.|.:|   |..|.
 Frog   124 NTGEATEAEGAEPSSGKHAVYAVQVIAGEDEADGRETKISQSALTVPLAPGHTSSEV---PVLPP 185

  Fly   243 FLD-------------------NNCGEDNGGCAHICKRLLYPDEN----------QPINKC---- 274
            ||:                   .:.|...||..|:   :.:|:.:          :|:.:|    
 Frog   186 FLNVRVHHPPNASIQVHRIDGLGSEGSTGGGAPHL---IAHPEGSKAIPSRPLTYKPLGRCFQDT 247

  Fly   275 ----DCREGYTLDPNDYASCLDIDECLESNGGCSEICENLPGEYKCSCQEGYYLDESGKSCVDIN 335
                ||      ..|........::|..|.|       ...|::||                  :
 Frog   248 LPKQDC------STNPLPGLTKEEDCCGSVG-------TSWGQHKC------------------H 281

  Fly   336 ECANPELSSNCQGACENLPGSYRCVEPLEENPEITEVVENPIEKTNEVPVNVSESQPAGKTCNSG 400
            :|  |:||.:         |:::......|:                           |..|..|
 Frog   282 KC--PQLSYS---------GTHKTAPFRGEH---------------------------GSNCPQG 308

  Fly   401 FQLSADGTDCQDINECEVDGPEDLDNNAVCQQ-KCENTIGSFRCTCVEGYHLLEDQRSCALD--- 461
            :: ..:.|.|||||||.:.|        |||. :|.||.|||||||..||..:..|..||.:   
 Frog   309 YK-RLNSTHCQDINECVMQG--------VCQNGECLNTQGSFRCTCKHGYIFISSQMHCAPEKPE 364

  Fly   462 -------------SCTDLENPQLNRTRC--------AHECQDLP---EGSYRCVCP--KGYE--- 497
                         .|....:.:|.|..|        ..:|:..|   ..|:..:||  |||.   
 Frog   365 VKGLCYRLVGTDGQCQHPLSTRLTRQLCCCSVGKAWGSQCEPCPADGTASFSEICPAGKGYHVLM 429

  Fly   498 ----LSEDQHS--------------CLVQESP-------------------------CSTEKGVE 519
                |:...||              .||...|                         .||....|
 Frog   430 SHQTLTIQAHSDFTLHLHPEGGENQPLVPRVPDVVAPPKITEPDSSDGDVTAPVLPAYSTHSEEE 494

  Fly   520 KCSPGTCLASEDNTSF------------SCICPTGYRSEAFSC-----QDIDECAEDTHLCSH-T 566
            .......:.:....||            ..|.|..|...|...     .:.|||.....||.. .
 Frog   495 SVDFAPVITTTQGISFPEVALKPTVVAVKNIPPEYYNRSAVEIAVTKGTETDECKLTRDLCGFGE 559

  Fly   567 CQNTPGGYQCQCPEGLN-LVEEYTCLAENLCEVNNNGCEQ-ICLTARGGV-CACREGFRLSA--D 626
            |.:||.||.|.|..|.. ..|...|:..|.|:.|..|..: :||...|.. |.|..|:||..  :
 Frog   560 CISTPSGYYCSCYPGYQPHPERKHCIDINECDKNPCGPGRGVCLNTGGSFNCRCHLGYRLQVANE 624

  Fly   627 GKSCEDVDECLVNNGGC--QQVCRNLPGSYGCICAAGYELLKLDGIRGYCFDIDECSQRTHGCSD 689
            .:||.||:||| ..|.|  .:.|.|.||||.|.|..||:......:  .|.|||||..|......
 Frog   625 LRSCVDVNECL-RTGVCGDSRSCFNFPGSYKCECQLGYKQRTTRPL--VCEDIDECLSRQPCVGG 686

  Fly   690 QMLCENLNGSYTCLCPPGYALGLDNHIVTSLNSSFITDSTSSETPSAHTCLDIDECSLANGNCSH 754
            :  |.|:.||:.|:|||||.|    |                   :.|.|.|||||.|....||.
 Frog   687 K--CINIPGSFRCVCPPGYKL----H-------------------NQHICKDIDECLLNPDLCSP 726

  Fly   755 F--CQNEPGGFQCACPLGYALSEDMRTCQDI-------------------DECLDSNGQCSQLCL 798
            .  |:|..|.:.|.|..||..|||.:.|:::                   |..|..|....|.|.
 Frog   727 HGTCENVDGSYMCICDTGYTPSEDRKRCEEVVRSLDRRDCFLSLDDSLFCDSVLAVNVTREQCCC 791

  Fly   799 NQPGGFACACE---------TGFE-LTPDGFG--------------CADIDECSQDYGN--CSD- 836
            :...|:...||         ..|. |.|||.|              ..||||| |.:|.  |.: 
 Frog   792 SLGAGWGDHCEIYPCPVHNSAEFSTLCPDGIGFIIDLDIMTYGSPTYRDIDEC-QLFGQEICKEG 855

  Fly   837 ICINLLGTHACACERGYELAKDKLSCLDVDEC---AGLLSGGCSH-------------------- 878
            :|:|...::.|.|:.||......|.|:|||||   :..::|.|.:                    
 Frog   856 MCVNTKPSYECYCKHGYYYDNRLLQCMDVDECVDESNCINGRCMNTRGSFYCHCPQHTQYHPELK 920

  Fly   879 ----------------------ECINKAGTFECGCPLGYILNDDGRSCSP--------------- 906
                                  .|:|..|:|.|.|...:.|:..||.|:|               
 Frog   921 QCLSNAELDVDECRDPGLCRNGRCVNTHGSFHCECTHPWTLDPLGRHCNPPEMQSDREAQDICWR 985

  Fly   907 -----------------ALVGC----PPGTQRSADGCAP---IECNPG----------------- 930
                             :|..|    ..|...|...|.|   ::|:..                 
 Frog   986 MRGTDGICSQSMPGPQLSLAECCCRQGQGWGLSCHSCPPRHALQCSASHSEANSFWESSALHIKK 1050

  Fly   931 YTLGSDDKCVDIDECQKQNGGCSHRCSNTEGSF--KCSCPPGYELDSDQKTCQDIDECDQDK--- 990
            |....|......|||...||.|      ..|.:  .|.||.|::||..:..|.|:|||.|..   
 Frog  1051 YRRDHDSSEEGSDECPCVNGHC------RRGPYGVSCECPVGFQLDITRTRCLDLDECRQKNPRG 1109

  Fly   991 TSCITGTCINEIGGFRC----EFPKFP 1013
            :.|....|||.:|.|||    .:.:||
 Frog  1110 SLCKNSRCINTMGSFRCVCKPGYTRFP 1136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fracNP_001137905.1 FXa_inhibition 296..331 CDD:291342 6/34 (18%)
cEGF 396..415 CDD:289433 7/18 (39%)
FXa_inhibition 425..458 CDD:291342 16/33 (48%)
FXa_inhibition 476..505 CDD:291342 12/62 (19%)
vWFA <550..586 CDD:294047 13/42 (31%)
FXa_inhibition 596..630 CDD:291342 11/37 (30%)
FXa_inhibition 636..>664 CDD:291342 14/29 (48%)
EGF_CA 676..715 CDD:284955 17/38 (45%)
FXa_inhibition 745..780 CDD:291342 14/36 (39%)
FXa_inhibition 786..821 CDD:291342 13/58 (22%)
FXa_inhibition 827..862 CDD:291342 11/37 (30%)
FXa_inhibition 874..904 CDD:291342 11/71 (15%)
FXa_inhibition 945..980 CDD:291342 11/36 (31%)
CCP 1110..1170 CDD:153056
CCP 1183..1235 CDD:153056
DUF5011 1468..1536 CDD:295940
ltbp3XP_002935409.2 EGF_CA 319..>349 CDD:214542 19/37 (51%)
TB 379..420 CDD:395554 7/40 (18%)
cEGF 566..589 CDD:403760 7/22 (32%)
EGF_CA 586..618 CDD:214542 10/31 (32%)
EGF_CA 630..666 CDD:214542 17/36 (47%)
EGF_CA 673..707 CDD:238011 18/58 (31%)
EGF_CA 713..755 CDD:214542 18/41 (44%)
TB 776..819 CDD:395554 10/42 (24%)
EGF_CA 883..>910 CDD:214542 7/26 (27%)
EGF_CA 929..968 CDD:214542 9/38 (24%)
TB 993..>1026 CDD:395554 6/32 (19%)
EGF_CA 1098..1133 CDD:214542 13/34 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D4721at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24034
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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