DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16998 and LOC683849

DIOPT Version :9

Sequence 1:NP_648134.1 Gene:CG16998 / 38847 FlyBaseID:FBgn0035795 Length:258 Species:Drosophila melanogaster
Sequence 2:XP_003749780.1 Gene:LOC683849 / 683849 RGDID:1597830 Length:246 Species:Rattus norvegicus


Alignment Length:254 Identity:91/254 - (35%)
Similarity:123/254 - (48%) Gaps:33/254 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ALILLLICGHKTSALSP---QERIVGGVEVPIHLTPWLASITVHGNYSCSSALITSLWLVTAGHC 66
            ||::|.:.|  |:...|   .::||||.....:..|:..|:. .|.:.|..:||...|:|:|.||
  Rat     3 ALLILALVG--TAVAFPVDDDDKIVGGYTCQENSVPYQVSLN-SGYHFCGGSLINDQWVVSAAHC 64

  Fly    67 VQYPDSYSVRAGS---TFTDGGGQRRNVVSVILHPDFNLRTLENDIALLKLDKSFTLGGNIQVVK 128
              |.....||.|.   ...:|..|..|...:|.||:|:.:||.|||.|:||.....|...:..|.
  Rat    65 --YKSRIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVA 127

  Fly   129 LPLPSLNILPRTLLVAGWGN--------PDATDSESEPRLRGTVVKVINQRLCQRLYSHLHRPIT 185
            || .|........|::||||        ||.......|        ::.|..|:..|.   ..||
  Rat   128 LP-SSCAPAGTQCLISGWGNTLSFGVNEPDLLQCLDAP--------LLPQADCEASYP---GKIT 180

  Fly   186 DDMVCAA--GAGRDHCYGDSGAPLVHRGSSYGIVSFAHGCADPHFPGVYTRLANYVTWI 242
            |:||||.  ..|:|.|.||||.|:|..|...||||:.:|||.|..|||||::.|||.||
  Rat   181 DNMVCAGFLEGGKDSCQGDSGGPVVCNGELQGIVSWGYGCALPDNPGVYTKVCNYVDWI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16998NP_648134.1 Tryp_SPc 24..242 CDD:214473 83/230 (36%)
Tryp_SPc 25..242 CDD:238113 83/229 (36%)
LOC683849XP_003749780.1 Tryp_SPc 23..239 CDD:214473 83/230 (36%)
Tryp_SPc 24..242 CDD:238113 85/231 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBP0
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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