DRSC/TRiP Functional Genomics Resources

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Protein Alignment lqf and AT5G11710

DIOPT Version :10

Sequence 1:NP_729266.2 Gene:lqf / 38846 FlyBaseID:FBgn0028582 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_196732.2 Gene:AT5G11710 / 831043 AraportID:AT5G11710 Length:560 Species:Arabidopsis thaliana


Alignment Length:593 Identity:143/593 - (24%)
Similarity:234/593 - (39%) Gaps:153/593 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DDMQV---NVAGLRRNIKNLAHNYSDAQVKVREATSNDPWGPSAAIMSEIAELTYNVVAFSE--- 64
            |.|:|   .|..::|.:........:.:.||.:||.|:||||....::|||:.|..   |||   
plant     2 DFMKVFDQTVREIKREVNLKVLKVPEMEQKVLDATDNEPWGPHGTALAEIAQATKK---FSECQM 63

  Fly    65 IMQMIWKRLNDHGKNWRHVYKALILLEYLIKTGSEKVAQQCKENIFAIQTLREFVYFE-EGKDQG 128
            :|.::|.||::.||:||:|||||.:::|||..|||:...:..|:.:.|.:|..|.|.| .|||.|
plant    64 VMSVLWTRLSETGKDWRYVYKALAVIDYLISNGSERAVDEIIEHTYQISSLTSFEYVEPNGKDVG 128

  Fly   129 THVREKAKQLVTLLKDDERLKNERVKAQKAKERF-----------AQNPSGFGS---------DG 173
            .:||:||:.:|.||.:.|::...|.||...:.::           :.:.:.||.         |.
plant   129 INVRKKAENIVALLNNKEKISEIRDKAVANRNKYVGLSSTGITYKSGSSASFGGSFQSGSSNFDS 193

  Fly   174 YIDGPSQRDLPP---------GWQEEPPKSVSELEMVRPQTAGEEELQLQLAMAMSREEAEQEEA 229
            |.|..|:.|...         |.:.|.....|:....|..:...:.|        |..:...:.|
plant   194 YKDRDSREDKNDYESFQKSRRGVKTEEQSYTSKKSFSRYGSTDHDNL--------SSGKKSPDSA 250

  Fly   230 KRRSDDVRLQLALSQSEQDFKDPNGRPIPAPKKEEQQSHLLDLL--------------------- 273
            |.||   .:..|.|.::.||.|.:.|...:.|.....::.:||.                     
plant   251 KHRS---YVSAAPSNNDDDFDDFDPRGTSSNKPSTGSANQVDLFGGDLIGDFLDSGPTETSSTNN 312

  Fly   274 -------DISLGATSISSPPLGAAGGAPT-AVVDPWAMPGP-----RAP---------------- 309
                   |:...|..:|:...||..|:.| ..||.::...|     .||                
plant   313 NENFQEADLFADAAFVSASAQGAEFGSQTQKQVDLFSASEPSVTVSSAPPTVDLFASSESVVSPE 377

  Fly   310 SQLSDPWSGTSSPQVDPWNPSAAPRTILGAGVPMTSAPLGAGNDAWGART----------QSPSV 364
            :::|.|.|..:...|||:           |.|||.:..   |:|.:||.|          |:|||
plant   378 AKISIPESMATPNIVDPF-----------AAVPMDNFD---GSDPFGAFTSHSASVSTGPQAPSV 428

  Fly   365 -ASGSSNEGWLQSNGNANQNGRGATPAGPPAEGWLIKSTAVGALGAAPINHAANNGSSSSDPWLA 428
             .|.::....|....:..|:.:...|....:..|....:.    |...:|..|...:|.:|..:.
plant   429 HGSATNTTSPLSFADSKPQHLQKKDPFQVKSGIWADSLSR----GLIDLNITAPKKASLADVGVV 489

  Fly   429 EPAASAAGG-AAAVGLADPWAPGAASQTGAGALDDPWKALGTGAI----------KKQSPEF--D 480
            ...::..|. |:|......|:.||.|..|.           ||..          ::|:|:.  |
plant   490 GDLSNEDGNKASAASYYSGWSMGAGSGLGK-----------TGLYSTQQQQQQQQQQQAPDISDD 543

  Fly   481 EFDLITNR 488
            .|..::|:
plant   544 FFSSLSNQ 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lqfNP_729266.2 ENTH_Epsin 28..150 CDD:340787 53/125 (42%)
UIM 208..227 CDD:197845 2/18 (11%)
PHA03247 <278..394 CDD:223021 34/148 (23%)
AT5G11710NP_196732.2 ENTH 28..144 CDD:340772 52/118 (44%)

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