DRSC/TRiP Functional Genomics Resources

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Protein Alignment lqf and AT3G46540

DIOPT Version :9

Sequence 1:NP_729266.2 Gene:lqf / 38846 FlyBaseID:FBgn0028582 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_190238.1 Gene:AT3G46540 / 823807 AraportID:AT3G46540 Length:307 Species:Arabidopsis thaliana


Alignment Length:261 Identity:64/261 - (24%)
Similarity:120/261 - (45%) Gaps:37/261 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QVKVREATSNDPWGPSAAIMSEIAELTYNVVAFSEIMQMIWKRLNDHGK-NWRHVYKALILLEYL 93
            |:...|||..:..||:...:..|::..:....:..|::::.|||....| |||..|.:||::|:|
plant    47 QLMTEEATDGESCGPNTQTLGSISKAAFEFEDYLAIVEVLHKRLAKFDKRNWRMAYNSLIVVEHL 111

  Fly    94 IKTGSEKVAQQCKENIFAIQTLREFVYFEE-GKDQGTHVREKAKQLVTLLKDDERLKNERVKAQK 157
            :..|.|.|:.:.:.:|..|..::.|...:| |.:.|..||:||::::.||:..|.||.||.:|::
plant   112 LTHGPESVSDEFQGDIDVISQMQTFQQIDEKGFNWGLAVRKKAEKVLKLLEKGELLKEERKRARE 176

  Fly   158 AKERFAQNPSGFGSDGYIDGPSQRDLPPGWQEEPPKSVSELEMVRPQTAGEEELQLQLAMAMSRE 222
                .::...||||..:              :....|:||.|:::..|...   :.......:.:
plant   177 ----LSRGIQGFGSFNH--------------KSSSHSLSEHEVLQESTVYR---KCNSNFTKNYD 220

  Fly   223 EAEQEEAKRRSDDVRLQLALSQSEQDFKDPNGRPIPAPKKEEQQSHLLDLLDISLGATSISSPPL 287
            |.:||......:|..|          |.    :|:.|...||.::.:.:.:|......:..:|.|
plant   221 EDDQENTMVSPNDANL----------FP----QPLVADPSEESRTGMKENMDPEDDENTEVNPLL 271

  Fly   288 G 288
            |
plant   272 G 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lqfNP_729266.2 ENTH_epsin 28..149 CDD:239627 36/120 (30%)
UIM 208..227 CDD:197845 1/18 (6%)
AT3G46540NP_190238.1 ENTH 46..157 CDD:340772 33/109 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2056
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12276
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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