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Protein Alignment lqf and AT3G23350
DIOPT Version :9
Sequence 1: | NP_729266.2 |
Gene: | lqf / 38846 |
FlyBaseID: | FBgn0028582 |
Length: | 831 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001325534.1 |
Gene: | AT3G23350 / 821916 |
AraportID: | AT3G23350 |
Length: | 282 |
Species: | Arabidopsis thaliana |
Alignment Length: | 165 |
Identity: | 52/165 - (31%) |
Similarity: | 88/165 - (53%) |
Gaps: | 14/165 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 NVAGLRRNIKNLAHNYSDAQVKVREATSNDPWGPSAAIMSEIAELTYNVVAFSEIMQMIWKRLND 75
|||.| :..:.::|::.|.|.|:.||..|.|..|::|||.:::.|.:..|:.::.:::..
plant 23 NVARL------VLTDVTEAELLVEEVTNGDPSSPDAKTMTKIAEASFDTVEYWRIVDVLHRKIGK 81
Fly 76 HG---KNWRHVYKALILLEYLIKTGSEKVAQQCKENIFAIQTLREFVYFE-EGKDQGTHVREKAK 136
.. ||||..|||::|||:|:..|...:......::...:.|..|.|.: .|.|.|..|::||.
plant 82 DEREIKNWREAYKAMVLLEFLLMHGPIHLPHDFLYDLDHFRFLSTFQYVDNNGFDWGAQVQKKAD 146
Fly 137 QLVTLLKDDERLKNERVKAQKAKERFAQNPSGFGS 171
|:.|||...|.|:..|:||.|...:. :|||:
plant 147 QIQTLLLGKEELREARLKALKITSQI----NGFGN 177
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
lqf | NP_729266.2 |
ENTH_epsin |
28..149 |
CDD:239627 |
40/124 (32%) |
UIM |
208..227 |
CDD:197845 |
|
AT3G23350 | NP_001325534.1 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG2056 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR12276 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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