DRSC/TRiP Functional Genomics Resources

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Protein Alignment lqf and AT3G23350

DIOPT Version :9

Sequence 1:NP_729266.2 Gene:lqf / 38846 FlyBaseID:FBgn0028582 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_001325534.1 Gene:AT3G23350 / 821916 AraportID:AT3G23350 Length:282 Species:Arabidopsis thaliana


Alignment Length:165 Identity:52/165 - (31%)
Similarity:88/165 - (53%) Gaps:14/165 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NVAGLRRNIKNLAHNYSDAQVKVREATSNDPWGPSAAIMSEIAELTYNVVAFSEIMQMIWKRLND 75
            |||.|      :..:.::|::.|.|.|:.||..|.|..|::|||.:::.|.:..|:.::.:::..
plant    23 NVARL------VLTDVTEAELLVEEVTNGDPSSPDAKTMTKIAEASFDTVEYWRIVDVLHRKIGK 81

  Fly    76 HG---KNWRHVYKALILLEYLIKTGSEKVAQQCKENIFAIQTLREFVYFE-EGKDQGTHVREKAK 136
            ..   ||||..|||::|||:|:..|...:......::...:.|..|.|.: .|.|.|..|::||.
plant    82 DEREIKNWREAYKAMVLLEFLLMHGPIHLPHDFLYDLDHFRFLSTFQYVDNNGFDWGAQVQKKAD 146

  Fly   137 QLVTLLKDDERLKNERVKAQKAKERFAQNPSGFGS 171
            |:.|||...|.|:..|:||.|...:.    :|||:
plant   147 QIQTLLLGKEELREARLKALKITSQI----NGFGN 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lqfNP_729266.2 ENTH_epsin 28..149 CDD:239627 40/124 (32%)
UIM 208..227 CDD:197845
AT3G23350NP_001325534.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2056
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12276
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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