DRSC/TRiP Functional Genomics Resources

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Protein Alignment lqf and epn1b

DIOPT Version :9

Sequence 1:NP_729266.2 Gene:lqf / 38846 FlyBaseID:FBgn0028582 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_001122248.1 Gene:epn1b / 792915 ZFINID:ZDB-GENE-081022-126 Length:504 Species:Danio rerio


Alignment Length:629 Identity:218/629 - (34%)
Similarity:302/629 - (48%) Gaps:171/629 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LRRNIKNLAHNYSDAQVKVREATSNDPWGPSAAIMSEIAELTYNVVAFSEIMQMIWKRLNDHGKN 79
            |||.:|||..|:|:|:|||||||||||||||::.||:|::|||||||.:||:.|:|||||| .||
Zfish     6 LRRQLKNLVQNFSEAEVKVREATSNDPWGPSSSQMSDISDLTYNVVACNEILAMLWKRLND-DKN 69

  Fly    80 WRHVYKALILLEYLIKTGSEKVAQQCKENIFAIQTLREFVYFE-EGKDQGTHVREKAKQLVTLLK 143
            ||||||||.|||||:||||::|.||..|||..|:.|.|:.:.: :|||||.:||||||.::.|::
Zfish    70 WRHVYKALTLLEYLLKTGSDRVPQQSVENIHIIKALSEYRFTDKDGKDQGVNVREKAKIVMVLIE 134

  Fly   144 DDERLKNERVKAQKAKERFAQNPSGFGSDGYIDGPSQRDLPPGWQEEPP----KSVSEL--EMVR 202
            |:|:.|.||..|.|.|::..:.|:  .|...:....:.::|| :...|.    .||::|  ||.|
Zfish   135 DEEKRKEERDFAMKTKDKLTKAPN--VSSATVPEKEKPEIPP-YTGLPSLDNIPSVADLAAEMAR 196

  Fly   203 PQTAGEEELQLQLAMAMSREEAEQEEAKRRSDDVRLQLALSQSEQDFKDPNGR-PIPAPKKEEQQ 266
            .:   ||:.:|         |||::||:||:.:...:..|.:.....:.|:|. |..||.:...:
Zfish   197 KK---EEQKRL---------EAERKEAERRAKEGDTEPDLWEKGATAQPPSGSDPWGAPSEPSNE 249

  Fly   267 SHLLDLLDISLGATSISSP----PLGAA-----GGAPTAVVDPWAMPGPRAPSQLS-DPWSGT-- 319
            |...|......|....|||    |.|.:     |.||.: .|||........|.:| |||..:  
Zfish   250 SATNDPWGAPSGEAKKSSPGTNDPWGGSADGTNGSAPPS-NDPWGESADNDSSPVSNDPWGESTN 313

  Fly   320 ---SSPQV--DPWNPSAAPRTILGAGVPMTSAPLGAGNDAWGARTQSPSVASGSSNEGWLQSNGN 379
               |||..  |||..|        ||||...||:  .||.|||..:||.                
Zfish   314 AEKSSPPAAGDPWGDS--------AGVPEEKAPV--KNDPWGASAESPK---------------- 352

  Fly   380 ANQNGRGATPAGPPAEGWLIKSTAVGALGAAPINHAANNGSSSSDPWLAEPAASAAG----GAAA 440
             :.:|:.|.|.|.|:|.  :|.:|..|                ||||.|...||:|.    |.|:
Zfish   353 -DSDGKTADPWGAPSES--VKDSAPAA----------------SDPWGAPLEASSATSDPFGDAS 398

  Fly   441 VGLADPWAPGAASQTGAGALDDPWKALGTGAIKKQSPEFDEFDLITNRN------KSEHSNSNAS 499
            ....|||...|:|...|   :|||.|....|           |.:||.:      ||:....::.
Zfish   399 KADNDPWGTAASSPPTA---NDPWGAPSAPA-----------DAMTNNDPFGDGGKSDPWGVSSE 449

  Fly   500 NNNNASLLDDMDPLSANYGNGGINSSMHPSTGATAKKSIKDAHSFLGENSALVNLDNL--IKPIA 562
            |.|||:                       ......|||     ||||:.::||:||:|  :||  
Zfish   450 NGNNAT-----------------------KPAEETKKS-----SFLGDGASLVDLDSLMSVKP-- 484

  Fly   563 PQTQTGNQPAYNPFSDNVVPPKTNLFQQQQPAVPSINQLKQQAP 606
                   :|...|.|                |:|:     |:||
Zfish   485 -------KPKQPPLS----------------AIPT-----QKAP 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lqfNP_729266.2 ENTH_epsin 28..149 CDD:239627 77/121 (64%)
UIM 208..227 CDD:197845 6/18 (33%)
epn1bNP_001122248.1 ENTH_epsin 19..132 CDD:239627 74/113 (65%)
TM_PBP2 232..>291 CDD:294296 16/59 (27%)
TM_PBP2 286..>333 CDD:294296 18/55 (33%)
TM_PBP2 398..>433 CDD:294296 14/48 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576790
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1263849at2759
OrthoFinder 1 1.000 - - FOG0000780
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12276
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X540
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.910

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