DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lqf and Epn3

DIOPT Version :9

Sequence 1:NP_729266.2 Gene:lqf / 38846 FlyBaseID:FBgn0028582 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_082260.1 Gene:Epn3 / 71889 MGIID:1919139 Length:636 Species:Mus musculus


Alignment Length:712 Identity:274/712 - (38%)
Similarity:374/712 - (52%) Gaps:149/712 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VNVAGLRRNIKNLAHNYSDAQVKVREATSNDPWGPSAAIMSEIAELTYNVVAFSEIMQMIWKRLN 74
            :..:.|||.:||:.||||:|::|||||||||||||.:::|||||:||:|.|||:|:|.|:|:|||
Mouse     1 MTTSALRRQVKNIVHNYSEAEIKVREATSNDPWGPPSSLMSEIADLTFNTVAFAEVMGMVWRRLN 65

  Fly    75 DHGKNWRHVYKALILLEYLIKTGSEKVAQQCKENIFAIQTLREFVYFE-EGKDQGTHVREKAKQL 138
            |.|||||||||||.||:||:|||||:||.||:||::.||||::|.|.: :|||||.:||||.||:
Mouse    66 DSGKNWRHVYKALTLLDYLLKTGSERVAHQCRENLYTIQTLKDFQYIDRDGKDQGVNVREKVKQV 130

  Fly   139 VTLLKDDERLKNERVKAQKAKERFAQNPSGFGSD--GYIDGPSQRDLPPGW--QEEPPKSVSELE 199
            :.||||:|||:.||..|.|.|||.|....|.||.  ||  ....|..|..:  ....|:..|:||
Mouse   131 MALLKDEERLRQERTHALKTKERMALEGMGIGSGQLGY--SRRSRGSPSSYTSASSSPRYASDLE 193

  Fly   200 MVRPQTAGEEELQLQLAMAMSREEAEQ--EEAKRRSDDVRLQLALSQSEQDFK------------ 250
            ..||||:||||||||||:||||||||:  ..|..|.:|::||||||.|.|:.:            
Mouse   194 QARPQTSGEEELQLQLALAMSREEAERPVPPASHRDEDLQLQLALSLSRQEHEKGVRSWKGDDSP 258

  Fly   251 -----DPNGR-------PIPAPKKEEQ-----QSHLLDLLDISLGATSISSPPLGAAGGAPTAVV 298
                 :|.|:       |....:|||:     ||.:|||.||...|.::.|....|         
Mouse   259 VANGAEPAGQRRQRDREPEREERKEEEKLKTSQSSILDLADIFAPAPALPSTHCSA--------- 314

  Fly   299 DPWAMPGPRAPSQLSDPWSGTSSPQVDPWNPSAAPRTILGAGVPMTSAPLGAGNDAWGARTQS-- 361
            |||.:||.| |:  ::|...:..|..|||:|           ||       :||..  :|:|.  
Mouse   315 DPWDIPGLR-PN--TEPSGSSWGPSADPWSP-----------VP-------SGNAL--SRSQPWD 356

  Fly   362 --PSVASGSSNEGWLQSNGNANQNGR-GATPAGPP-AEGWLIKSTAVGALGAAPINHAANNGSSS 422
              |::   ||:|.|          || ...|:||| |:.|            ||.:......|:.
Mouse   357 LLPTL---SSSEPW----------GRTPVLPSGPPIADPW------------APSSPTRKLPSTG 396

  Fly   423 SDPW---LAEPAASAAGGAAAVGLADPWAPGAASQTGAGALDDPWKALGTGAIKKQSPEFDEFDL 484
            :|||   :.....||.|||:..   ||:|....| |......|..:||.||    :||...|.| 
Mouse   397 ADPWGASMETSDTSALGGASPF---DPFAKPLES-TEPKESRDSAQALPTG----KSPSTVELD- 452

  Fly   485 ITNRNKSEHSNSNASNNNNASLLDDMDPLSANYGNGGINSSMHPSTGATAKKSIKDAHSFLGEN- 548
                   ...:|:.|...|..    .:|.:.:.|..|......|...|   :..:...||||.: 
Mouse   453 -------PFGDSSPSCKQNGM----KEPEALDLGVLGEALPQQPGKEA---RPCRTPESFLGPSA 503

  Fly   549 SALVNLDNLIK-PIAPQTQTGNQPAYNPFSDNV-VPPKTNLFQQQQPAVPSINQLKQQAPFSVSM 611
            |:|||||:|:| |:|.:|:       |||...: ||..||.|.......|::||::..:|   ::
Mouse   504 SSLVNLDSLVKAPLAARTR-------NPFLTGLGVPSPTNPFGAGDQGRPTLNQMRTGSP---AL 558

  Fly   612 NQDPWAPVMGGV-STTSQPKLPPPVRPTSLNLG---PSSVGEFQLLSALSNPIIPIAHIPQP 669
            ...|..||...| |.|....||.|:  :|:.:|   |:||..|....|.:.|  | |.:|||
Mouse   559 GLPPGGPVGAPVGSMTYSASLPLPL--SSVPVGATLPASVSVFPQAGAFAPP--P-ASLPQP 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lqfNP_729266.2 ENTH_epsin 28..149 CDD:239627 82/121 (68%)
UIM 208..227 CDD:197845 17/20 (85%)
Epn3NP_082260.1 ENTH_Epsin 19..142 CDD:340787 83/122 (68%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 153..503 131/431 (30%)
UIM 202..221 CDD:197845 17/18 (94%)
PHA03247 <302..634 CDD:223021 117/409 (29%)
5 X 3 AA repeats of [DE]-P-W 315..400 36/132 (27%)
3 X 3 AA repeats of N-P-F 523..635 34/101 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 607..636 6/12 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834095
Domainoid 1 1.000 210 1.000 Domainoid score I2811
eggNOG 1 0.900 - - E1_KOG2056
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 369 1.000 Inparanoid score I2121
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1263849at2759
OrthoFinder 1 1.000 - - FOG0000780
OrthoInspector 1 1.000 - - otm43853
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12276
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X540
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.860

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