DRSC/TRiP Functional Genomics Resources

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Protein Alignment lqf and Epn3

DIOPT Version :9

Sequence 1:NP_729266.2 Gene:lqf / 38846 FlyBaseID:FBgn0028582 Length:831 Species:Drosophila melanogaster
Sequence 2:XP_006247263.1 Gene:Epn3 / 360605 RGDID:1306416 Length:635 Species:Rattus norvegicus


Alignment Length:712 Identity:270/712 - (37%)
Similarity:371/712 - (52%) Gaps:150/712 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VNVAGLRRNIKNLAHNYSDAQVKVREATSNDPWGPSAAIMSEIAELTYNVVAFSEIMQMIWKRLN 74
            :..:.|||.:||:.||||:|::|||||||||||||.:::|||||:||:|.|||:|:|.|:|:|||
  Rat     1 MTTSALRRQVKNIVHNYSEAEIKVREATSNDPWGPPSSLMSEIADLTFNTVAFAEVMGMVWRRLN 65

  Fly    75 DHGKNWRHVYKALILLEYLIKTGSEKVAQQCKENIFAIQTLREFVYFE-EGKDQGTHVREKAKQL 138
            |.|||||||||||.||:||:|||||:||.||:||::.||||::|.|.: :|||||.:||||.||:
  Rat    66 DSGKNWRHVYKALTLLDYLLKTGSERVAHQCRENLYTIQTLKDFQYIDRDGKDQGVNVREKVKQV 130

  Fly   139 VTLLKDDERLKNERVKAQKAKERFAQNPSGFGSDGYIDGPSQRDLPPGW--QEEPPKSVSELEMV 201
            :.||||:|||:.||..|.|.|||.|....|.||.........|..|..:  ....|:..|:||..
  Rat   131 MALLKDEERLRQERTHALKTKERMALEGMGIGSGQLGFSRRSRGSPSSYTSASSSPRYASDLEQA 195

  Fly   202 RPQTAGEEELQLQLAMAMSREEAEQ--EEAKRRSDDVRLQLALSQSEQ------------DFKDP 252
            ||||:||||||||||:||||||||:  ..|..|.:|::||||||.|.|            ||...
  Rat   196 RPQTSGEEELQLQLALAMSREEAEKPVPPASHRDEDLQLQLALSLSRQEHEKGGRSWKGDDFPVA 260

  Fly   253 NGRPIPA--------PKKEEQ---------QSHLLDLLDISLGATSISSPPLGAAGGAPTAVVDP 300
            ||.. ||        |::||:         ||.:|||.|:...|.::.|....|         ||
  Rat   261 NGAE-PAGQRRRDREPEREERKEEEKLKTSQSSILDLADVFAPAPALPSTHCSA---------DP 315

  Fly   301 WAMPGPRAPSQLSDPWSGTSSPQVDPWNPSAAPRTILGAGVPMTSAPLGAGNDAWGARTQS---- 361
            |.:||.| |:  ::|...:..|..|||:|           ||       :||..  :|:|.    
  Rat   316 WDIPGLR-PN--TEPSGSSWGPSADPWSP-----------VP-------SGNAL--SRSQPWDLL 357

  Fly   362 PSVASGSSNEGWLQSNGNANQNGR-GATPAGPP-AEGWLIKSTAVGALGAAPINHAANNGSSSSD 424
            |::   ||:|.|          || ...|:||| .:.|            ||.:......|:..|
  Rat   358 PTL---SSSEPW----------GRTPVLPSGPPITDPW------------APSSPTPKLPSTGVD 397

  Fly   425 PWLAEPAASAAGGAAAVGLADPWAPGAASQTGAGALD--DPWKALGTGAIKKQSP-EFDEFDLIT 486
            ||.|....|   ..:|:|.|.|:.|.|........::  |..:||..|  |..|| |.|.|.   
  Rat   398 PWGASVETS---NTSALGGASPFDPFAKPLESTEPMESRDSAQALPKG--KSPSPVELDPFG--- 454

  Fly   487 NRNKSEHSNSNASNNNNASLLDDMDPLSANYGNGGINSSMHPSTGATAKKSIKDAHSFLGEN-SA 550
                   .:|.:...|.....:.:|       .|.:..::....|..| :..:...||||.: |:
  Rat   455 -------DSSPSCKQNGVKETEALD-------LGVLGEALTQQPGKEA-RPCRTPESFLGPSASS 504

  Fly   551 LVNLDNLIK-PIAPQTQTGNQPAYNPFSDNV-VPPKTNLFQQQQPAVPSINQLKQQAPFSVSMNQ 613
            |||||:|:| |:|.:|:       |||...: .|..||.|...:...|::||::..:|   ::..
  Rat   505 LVNLDSLVKAPLAARTR-------NPFLTGLSAPSPTNPFGAGEQGRPTLNQMRTGSP---ALGL 559

  Fly   614 DPWAPVMGGV---STTSQPKLPPPVRPTSLNLG---PSSVGEFQLLSALSNPIIPIAHIPQP 669
            .|..||  ||   |.|....||.|:  :|:.:|   |:||..|....|.:.|  | |.:|||
  Rat   560 PPGGPV--GVPLGSMTYSASLPLPL--SSVPVGATLPASVSVFPQAGAFAPP--P-ASLPQP 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lqfNP_729266.2 ENTH_epsin 28..149 CDD:239627 82/121 (68%)
UIM 208..227 CDD:197845 17/20 (85%)
Epn3XP_006247263.1 ENTH_epsin 19..141 CDD:239627 82/121 (68%)
UIM 202..221 CDD:197845 17/18 (94%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337636
Domainoid 1 1.000 208 1.000 Domainoid score I2758
eggNOG 1 0.900 - - E1_KOG2056
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 367 1.000 Inparanoid score I2084
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1263849at2759
OrthoFinder 1 1.000 - - FOG0000780
OrthoInspector 1 1.000 - - otm45941
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12276
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X540
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.900

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