DRSC/TRiP Functional Genomics Resources

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Protein Alignment lqf and SPCC794.11c

DIOPT Version :9

Sequence 1:NP_729266.2 Gene:lqf / 38846 FlyBaseID:FBgn0028582 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_587759.1 Gene:SPCC794.11c / 2539421 PomBaseID:SPCC794.11c Length:476 Species:Schizosaccharomyces pombe


Alignment Length:546 Identity:135/546 - (24%)
Similarity:228/546 - (41%) Gaps:146/546 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 RNIKNLAHNYSDAQVKVREATSNDPWGPSAAIMSEIAELTYNVVAFSEIMQMIWKRLNDH-GKNW 80
            |..:|:..||:..:.:|||||:|:|||.|.::|.|||:.|:|....:||:.||::|..:. .:.|
pombe    21 RKAQNVVMNYTSMEARVREATNNEPWGASTSLMMEIAQGTHNYSQLNEILPMIYRRFTEKTAEEW 85

  Fly    81 RHVYKALILLEYLIKTGSEKVAQQCKENIFAIQTLREFVYFE-EGKDQGTHVREKAKQLVTLLKD 144
            |.:||||.|||:|:|.|||:|....:.:...|:.||.|.|.: ..||||.:||.:||:||.||.|
pombe    86 RQIYKALQLLEFLVKNGSERVVDDARAHQATIKMLRNFHYIDHRQKDQGLNVRTRAKELVELLND 150

  Fly   145 DERLKNERVKAQKAKERFAQNPSGFGSDG--------------------------YIDGPSQRDL 183
            .||::.||.:|::.:.:|.    |.||||                          |.||....|.
pombe   151 SERIRKERKRARQNRGKFI----GVGSDGDSRISTSSKSRFPSFGSSRGSYRTRVYGDGGGFTDY 211

  Fly   184 PPGWQEEPPKSVSELEMVRPQTAGEEELQLQLAMAMSREEAEQ--EEAKRRSDDVRLQLALSQSE 246
            ..|:.:..                        :|:.||:.::.  ||.....|......|.:.|.
pombe   212 GNGYHDSS------------------------SMSDSRDASDNDVEEYNEDGDGGSSDAATANST 252

  Fly   247 QDFKDPNGRPI-PAPKKEEQQSHLLDLLDISLGATSISSPPLGAAGGAPTAVVDPWAMPGPRAPS 310
            :..:....:.. .||::.:|:|.::|||.:.                                  
pombe   253 RGSRRTTTKQSDKAPEQPKQESAMIDLLGLD---------------------------------- 283

  Fly   311 QLSDPWSGTSSPQVDPWNPSAAPRTILGAGVPMTSAPLGAGNDAWG-ARTQSPSVASGSSNEGWL 374
              ::|     ||        |.|:|       .|||||...:|.:| .::.:.:.||.:.|...|
pombe   284 --NEP-----SP--------AQPQT-------NTSAPLAFEDDGFGDFQSSAAAPASSTLNNASL 326

  Fly   375 ----QSNGNANQNGRGA------TPAGPPAEGWLIKSTAVGALGAAPINHAANNGSSSSDPWLAE 429
                |:...|.:|...|      .|:..||.    .:.|..::.....| :.|...:||..:..:
pombe   327 FMGSQTASTAAKNDDDAFDDFQSAPSAKPAS----NTAAFSSISFGGFN-SLNQLPTSSSAFTPQ 386

  Fly   430 PAASAAGGAAAVGLADPWAPGAASQTG-------------AGALDDPWKALGTGAIKKQSPEFDE 481
            |.....|..:|.|::...: ..:||.|             :|:..|.:.:|.:.|:.|...|...
pombe   387 PTTFNTGYTSAFGMSSGLS-NTSSQAGLGLTSQQPTAAKSSGSNGDAFGSLWSSAVNKVHQENST 450

  Fly   482 FD-LITNRNKSEHSNSNASNNNNASL 506
            .: ::::.::......|..:|:|..|
pombe   451 RERVVSSSSEPVSKTQNFLDNDNLLL 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lqfNP_729266.2 ENTH_epsin 28..149 CDD:239627 56/122 (46%)
UIM 208..227 CDD:197845 3/20 (15%)
SPCC794.11cNP_587759.1 ENTH_epsin 33..155 CDD:239627 56/121 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2056
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 168 1.000 Inparanoid score I1201
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000780
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12276
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2102
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.990

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