Protein Alignment lqf and rsd-3

DIOPT Version :9

• Sequence 1: NP_729266.2
• Gene: lqf / 38846
• FlyBaseID: FBgn0028582
• Length: 831
• Species: Drosophila melanogaster
• Sequence 2: NP_509973.1
• Gene: rsd-3 / 181358
• WormBaseID: WBGene00004682
• Length: 483
• Species: Caenorhabditis elegans
• Alignment Length: 557
• Identity: 148/557 - (26%)
• Similarity: 233/557 - (41%)
• Gaps: 144/557 - (25%)

  Fly    12 VAGLRRNIKNLAH--------------------NYSDAQVKVREATSNDPWGPSAAIMSEIAELT 56
            :||:..:||:.|:                    ||..|.:.|||||:.|||||:...|.:|.|.|
 Worm     5 LAGITTSIKSTANAITKNEYVRKVTESMNDAIMNYPKAMMDVREATNEDPWGPTGPQMKKICEYT 69

  Fly    57 YN--VVAFSEIMQMIWKRLNDHGKN-WRHVYKALILLEYLIKTGSEKVAQQCKENIFAIQTLREF 118
            .:  :..|..:...:::|:.::.|: ||.|||:||||:||:|.|||:..|:.:|..:.::.|..:
 Worm    70 RSRYMEDFYNVYTPLFQRMLENNKDAWRRVYKSLILLDYLLKNGSERFVQEAREKAYELRRLESY 134

  Fly   119 VYFEE-GKDQGTHVREKAKQLVTLLKDDERLKNERVKA---QKAKERFAQNPSGFGSDGY---ID 176
            .|.:| |||||.::|.:.||::.::.|||.|:.||.||   .|:|.|        |.|.|   :.
 Worm   135 KYIDEKGKDQGINIRHRVKQILEMMNDDELLQAERQKANSDDKSKYR--------GFDQYDMKMS 191

  Fly   177 GPSQRDLPPG----WQEEPPKSVSELEMVRPQTAGEEELQLQLAMAMSREEAEQ----EEAKRRS 233
            |.|.:....|    |.:|...|.|..:....|...:|......:..::|..:.:    :::|::.
 Worm   192 GSSFKSSNSGYDNKWDKEDSFSSSVTKKYDDQYKSKEVSNFSFSSNVNRSPSPELGFVDDSKKKD 256

  Fly   234 DDVRL-QLALSQSEQDFKDPNGRPIPAPKKEEQQSHLLDLLDISLGATSISSPPLGAAGGAPTAV 297
            ||... ....|:|.|.......:|.|:      :|...|.:           |.:....|||:..
 Worm   257 DDDGFGDFVSSRSSQPAATNKSKPNPS------KSFFDDPI-----------PAIPPPSGAPSNY 304

  Fly   298 VDPWAMP----GPRAPSQLSDPWSGT-SSPQVDPWNPSAAPRTILG-AGVPMTSAPLGAGNDAWG 356
            |.|...|    .||....|.|..:.| ::||     .:.||..:.| ...|:.:|
 Worm   305 VAPPLSPVSKNAPRNMDLLFDVSAPTPAAPQ-----NNGAPIDLFGKLDAPVVNA---------- 354

  Fly   357 ARTQSPSVASGSSNEGWLQSNGNANQNGRGATPAGPPAEGWLIKSTAVGALGAAPINHAANN--- 418
                :|:||         .|||..:....||.|        :.:|..:....|||||.|:|.
 Worm   355 ----APAVA---------PSNGGLDLFAFGAAP--------MAQSIPMATPVAAPINTASNGSFN 398

  Fly   419 ----GSSSSDPWLAEPAASAAGGAAAV----GLADPWAPGAASQTG----------AGALDDPWK 465
                |||......:.|   :.||||.:    ||:.|.|..|.|..|          ||.  |.:.
 Worm   399 GFDFGSSFGSTNNSTP---SYGGAAPLQPMSGLSQPQAQPAQSNLGGPSPKIGNSFAGL--DQFM 458

  Fly   466 ALGTGAIKKQSPEFDEFDLITNRNKSEHSNSNASNNN 502
            :|..|:....:|            |::..|.....||
 Worm   459 SLSLGSTNSNAP------------KAKTLNQMMGGNN 483

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lqf	NP_729266.2	ENTH_epsin	28..149	CDD:239627	49/124 (40%)
		UIM	208..227	CDD:197845	2/22 (9%)
rsd-3	NP_509973.1	ENTH_EpsinR	42..173	CDD:340786	53/130 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1263849at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2102
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.950