DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lqf and Epn1

DIOPT Version :10

Sequence 1:NP_729266.2 Gene:lqf / 38846 FlyBaseID:FBgn0028582 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_476477.1 Gene:Epn1 / 117277 RGDID:619772 Length:575 Species:Rattus norvegicus


Alignment Length:678 Identity:263/678 - (38%)
Similarity:344/678 - (50%) Gaps:149/678 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VNVAGLRRNIKNLAHNYSDAQVKVREATSNDPWGPSAAIMSEIAELTYNVVAFSEIMQMIWKRLN 74
            ::.:.|||.:||:.||||:|::||||||||||||||:::|||||:||||||||||||.|||||||
  Rat     1 MSTSSLRRQMKNIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMIWKRLN 65

  Fly    75 DHGKNWRHVYKALILLEYLIKTGSEKVAQQCKENIFAIQTLREFVYFE-EGKDQGTHVREKAKQL 138
            ||||||||||||:.|:|||||||||:|:||||||::|:|||::|.|.: :|||||.:||||||||
  Rat    66 DHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQGVNVREKAKQL 130

  Fly   139 VTLLKDDERLKNERVKAQKAKERFAQNPSGFGSDGYIDGPSQRDLPPGWQEEPPKSVSELEMVRP 203
            |.||:|::||:.||..|.|.||:.||..:. .|.....||            ||    |.|...|
  Rat   131 VALLRDEDRLREERAHALKTKEKLAQTATA-SSAAVGSGP------------PP----EAEQAWP 178

  Fly   204 QTAGEEELQLQLAMAMSREEAEQEEAKRRSDDVRLQLALSQS-EQDFKDPNGR---------PIP 258
            |::||||||||||:|||:|||:|..:....|||:||||||.| |:..|:...|         .|.
  Rat   179 QSSGEEELQLQLALAMSKEEADQPPSCGPEDDVQLQLALSLSREEHDKEERIRRGDDLRLQMAIE 243

  Fly   259 APKKE---EQQSHLLDLLDI-SLGATSISSPPLGAAGGAPTAV------VDPWAMPGPRAPSQLS 313
            ..|:|   :::|.|:||.|: :..|...:|.|.|.....||||      .|||..|   |....:
  Rat   244 ESKRETGGKEESSLMDLADVFTTPAPPQASDPWGGPASVPTAVPVAAAASDPWGAP---AVPPAA 305

  Fly   314 DPWSGTSSPQV--DPWNPSAAPRTILGAGVPMTSAPLGAGNDAWGARTQSPSVASGSSNEGWLQS 376
            |||.|.:....  |||.|               :||.|...|.||. |.:|:...|.:::.|..:
  Rat   306 DPWGGAAPTPASGDPWRP---------------AAPTGPSVDPWGG-TPAPAAGEGPTSDPWGSA 354

  Fly   377 NGNANQNGRGATPAGPPAEGWLIKSTAVGALGAAPINHAANNGSSSSDPWLAEPAASAAGGAAAV 441
            :|       ||..:|||                            |||||...||.|        
  Rat   355 DG-------GAPVSGPP----------------------------SSDPWAPAPAFS-------- 376

  Fly   442 GLADPWAPGAASQTGAGALDDPWKALGTGAIKKQSPEFDEFDLITNRNKSEHSNSNASNNNNASL 506
               |||....|..:..|.        ..|....:..||.:||    |.::....|.:|......|
  Rat   377 ---DPWGGSPAKPSSNGT--------AVGGFDTEPDEFSDFD----RLRTALPTSGSSTGELELL 426

  Fly   507 LDDMDPLSAN-YGNGGINSSMHPSTGATAKKSI--------KDAHSFLGENSALVNLDNLIKPIA 562
            ..::...|.. :...|:..|:..|.|:....:.        |...||||.|:|||:||:|:....
  Rat   427 AGEVPARSPGAFDMSGVGGSLAESVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPG 491

  Fly   563 PQTQTGNQPAYNPFSDNVVPPK----TNLFQQQQPAVPSINQLKQQAPFSVSMNQDPWAPVMGGV 623
            | |..|.: |.|||..:..|..    ||.||...||..::|||:          ..|..||.|..
  Rat   492 P-TPPGAK-ASNPFLPSGAPATGPSVTNPFQPAPPATLTLNQLR----------LSPVPPVPGAP 544

  Fly   624 ST-----TSQPKLPP--PVRPTSLNLGP 644
            .|     ...|.|||  |..|.:.|..|
  Rat   545 PTYISPLGGGPGLPPMMPPGPPAPNTNP 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lqfNP_729266.2 ENTH_Epsin 28..150 CDD:340787 93/122 (76%)
UIM 208..227 CDD:197845 15/18 (83%)
PHA03247 <278..394 CDD:223021 36/123 (29%)
Epn1NP_476477.1 ENTH_Epsin 19..142 CDD:340787 93/122 (76%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 149..186 17/53 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 264..283 4/18 (22%)
PRK07764 <270..437 CDD:236090 59/243 (24%)
8 X 3 AA repeats of D-P-W 274..379 44/169 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 293..575 98/369 (27%)
[DE]-X(1,2)-F-X-X-[FL]-X-X-X-R motif 401..410 5/12 (42%)
3 X 3 AA repeats of N-P-F 501..573 26/82 (32%)

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