DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lqf and Epn1

DIOPT Version :9

Sequence 1:NP_729266.2 Gene:lqf / 38846 FlyBaseID:FBgn0028582 Length:831 Species:Drosophila melanogaster
Sequence 2:XP_038935182.1 Gene:Epn1 / 117277 RGDID:619772 Length:576 Species:Rattus norvegicus


Alignment Length:680 Identity:265/680 - (38%)
Similarity:347/680 - (51%) Gaps:152/680 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VNVAGLRRNIKNLAHNYSDAQVKVREATSNDPWGPSAAIMSEIAELTYNVVAFSEIMQMIWKRLN 74
            ::.:.|||.:||:.||||:|::||||||||||||||:::|||||:||||||||||||.|||||||
  Rat     1 MSTSSLRRQMKNIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMIWKRLN 65

  Fly    75 DHGKNWRHVYKALILLEYLIKTGSEKVAQQCKENIFAIQTLREFVYFE-EGKDQGTHVREKAKQL 138
            ||||||||||||:.|:|||||||||:|:||||||::|:|||::|.|.: :|||||.:||||||||
  Rat    66 DHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQGVNVREKAKQL 130

  Fly   139 VTLLKDDERLKNERVKAQKAKERFAQNPSGFGSDGYIDGPSQRDLPPGWQEEPPKSVSELEMVRP 203
            |.||:|::||:.||..|.|.||:.||..:. .|.....||            ||    |.|...|
  Rat   131 VALLRDEDRLREERAHALKTKEKLAQTATA-SSAAVGSGP------------PP----EAEQAWP 178

  Fly   204 QTAGEEELQLQLAMAMSREEAEQEEAKRRSDDVRLQLALSQS-EQDFKDPNGR---------PIP 258
            |::||||||||||:|||:|||:|..:....|||:||||||.| |:..|:...|         .|.
  Rat   179 QSSGEEELQLQLALAMSKEEADQPPSCGPEDDVQLQLALSLSREEHDKEERIRRGDDLRLQMAIE 243

  Fly   259 APKKE---EQQSHLLDLLDI-SLGATSISSPPLGAAGGAPTAV------VDPWAMPGPRAPSQLS 313
            ..|:|   :::|.|:||.|: :..|...:|.|.|.....||||      .|||..|   |....:
  Rat   244 ESKRETGGKEESSLMDLADVFTTPAPPQASDPWGGPASVPTAVPVAAAASDPWGAP---AVPPAA 305

  Fly   314 DPWSGTSSPQV--DPWNPSAAPRTILGAGVPMTSAPLGAGNDAWGARTQSPSVASGSSNEGWLQS 376
            |||.|.:....  |||.|               :||.|...|.||. |.:|:...|.:::.|..:
  Rat   306 DPWGGAAPTPASGDPWRP---------------AAPTGPSVDPWGG-TPAPAAGEGPTSDPWGSA 354

  Fly   377 NGNANQNGRGATPAGPPAEGWLIKSTAVGALGAAPINHAANNGSSSSDPWLAEPAASAAGGAAAV 441
            :|       ||..:|||                            |||||...||.|        
  Rat   355 DG-------GAPVSGPP----------------------------SSDPWAPAPAFS-------- 376

  Fly   442 GLADPW--APGAASQTGAGALDDPWKALGTGAIKKQSPEFDEFDLITNRNKSEHSNSNASNNNNA 504
               |||  :|...|..|..|:         |....:..||.:||    |.::....|.:|.....
  Rat   377 ---DPWGGSPAKPSSNGTAAV---------GGFDTEPDEFSDFD----RLRTALPTSGSSTGELE 425

  Fly   505 SLLDDMDPLSAN-YGNGGINSSMHPSTGATAKKSI--------KDAHSFLGENSALVNLDNLIKP 560
            .|..::...|.. :...|:..|:..|.|:....:.        |...||||.|:|||:||:|:..
  Rat   426 LLAGEVPARSPGAFDMSGVGGSLAESVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSR 490

  Fly   561 IAPQTQTGNQPAYNPFSDNVVPPK----TNLFQQQQPAVPSINQLKQQAPFSVSMNQDPWAPVMG 621
            ..| |..|.: |.|||..:..|..    ||.||...||..::|||:          ..|..||.|
  Rat   491 PGP-TPPGAK-ASNPFLPSGAPATGPSVTNPFQPAPPATLTLNQLR----------LSPVPPVPG 543

  Fly   622 GVST-----TSQPKLPP--PVRPTSLNLGP 644
            ...|     ...|.|||  |..|.:.|..|
  Rat   544 APPTYISPLGGGPGLPPMMPPGPPAPNTNP 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lqfNP_729266.2 ENTH_epsin 28..149 CDD:239627 92/121 (76%)
UIM 208..227 CDD:197845 15/18 (83%)
Epn1XP_038935182.1 ENTH_Epsin 19..142 CDD:340787 93/122 (76%)
PRK07764 <270..438 CDD:236090 61/245 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337634
Domainoid 1 1.000 208 1.000 Domainoid score I2758
eggNOG 1 0.900 - - E1_KOG2056
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32172
Inparanoid 1 1.050 367 1.000 Inparanoid score I2084
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1263849at2759
OrthoFinder 1 1.000 - - FOG0000780
OrthoInspector 1 1.000 - - otm45941
orthoMCL 1 0.900 - - OOG6_103058
Panther 1 1.100 - - O PTHR12276
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X540
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.760

Return to query results.
Submit another query.