DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lqf and Mycbpap

DIOPT Version :9

Sequence 1:NP_729266.2 Gene:lqf / 38846 FlyBaseID:FBgn0028582 Length:831 Species:Drosophila melanogaster
Sequence 2:XP_006532001.1 Gene:Mycbpap / 104601 MGIID:2388726 Length:989 Species:Mus musculus


Alignment Length:710 Identity:132/710 - (18%)
Similarity:209/710 - (29%) Gaps:262/710 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 LVTLL-----------KDDER------------LKN------ERVKAQKAKERFAQNPSG----F 169
            |:||:           |::||            |||      .|.|.|:|..:..:.|:.    .
Mouse   214 LMTLISAKEEPKPKPPKEEERPSPWAPPPQHNFLKNWRRHIALRKKQQEALSKHLKKPASELLMH 278

  Fly   170 GSDGY---------IDG--PSQRD-LPPGWQEEP-------------PKSVSELEMVRPQTAGEE 209
            ..:.|         ||.  |:|.| ....|...|             .|..::..:|.|.|...:
Mouse   279 TGESYRKIQEEREVIDRALPTQHDGKATSWFWSPLEYLGDEMTGLLMTKKKTQRGLVEPITHIRK 343

  Fly   210 ELQLQLAMAMSREEAEQEEA-------------KRRSDDVRLQLALSQSEQDFKD----PNGRPI 257
            .|.:|:...:    ..|::|             .||.:...:...|..|:||...    .:|:|.
Mouse   344 PLSIQVETGL----PAQKDAWYRYTWDRSLFLIYRRKELQSIMAELDFSQQDIDGLEVVGHGKPF 404

  Fly   258 PAPKKEEQQSHLLDLLDISLGATSISSPP--LGAAGGAPTAVVDPWAMPGPRAPSQLSDP----- 315
            .:...||   ||               ||  :..:....|..:|.........|..:..|     
Mouse   405 SSVTVEE---HL---------------PPEKIQKSSSEDTVFLDSLTNLSDMVPMPILGPSLLFC 451

  Fly   316 -----WSGTSSPQVDPWNPSAAPRTILGAGVPMTSAPLGAGNDAWGARTQSP-SVASGSSNEGWL 374
                 |...|:|: |..|        :|.||.:|...|.      |.||.|. :|.:..:...|.
Mouse   452 GKPACWVRGSNPE-DKKN--------IGIGVRLTFETLE------GERTSSELTVVNNGTVAIWY 501

  Fly   375 QSNGNANQ----------------NGR------GATP----------AGPPAEGWLIKSTAVGAL 407
            ......:|                |.|      |.|.          ||...|.|.. .|....|
Mouse   502 NWRRRPHQDFFQDLKQNKTQRFYFNNREGVILPGETKHFTFFFKSLNAGIFRESWEF-GTHPTLL 565

  Fly   408 GAAPINHAANNGSSSSDPWLAEPAASAAGGAA--AVGLADPWAPGAASQTGAGALDDPWKALGTG 470
            |.|.:....:..|.:.|.::.|........||  |:.:|.            ..|.|..:.:.| 
Mouse   566 GGAVLQVTLHAISLTQDIFMDERKLLETKLAAHEAITIAQ------------SVLQDLLRGIST- 617

  Fly   471 AIKKQSPE-----FDEFDLITNRNK----------------SEHSNSNASNNNNASLLDDMDPLS 514
              .:::|.     ..|.||...||.                .::..:.|:.....||...:..|.
Mouse   618 --PERTPSPVDAYLTEEDLFNYRNPRLHYQHQVVQNLHQLWQQYRKAKATQKETPSLRTPVPLLL 680

  Fly   515 ANYGNGGIN--------SSMHPSTGATAKKSIKD----AHSFLGENSALVN--LDNLIKPIAPQT 565
            ....:|.|:        |.:.|.......:..:|    ..|.:|:.|....  ::.|:....|..
Mouse   681 VEKASGSISPRNLVSEYSQLSPHQEMDTARKTRDFFLSLKSSIGKKSVARKSIMEELLVEEGPDR 745

  Fly   566 QTGNQP-AYNPFSDNVVPPKTNL----FQQQQPAVP-------SINQLKQQAPFSVSMNQDP--- 615
            :|..:| |....|    |||.||    |:|.....|       ::.|| .:|...:...|.|   
Mouse   746 ETTQRPWALKSIS----PPKWNLCLEDFRQAVMTFPEELQREDALIQL-NKAAMELCQEQKPLQS 805

  Fly   616 ----------WAPVMGGVSTTS----------------------QPKLPPPVRPTSLNLG 643
                      |..|:..:.:.|                      |.:..|||..:.:..|
Mouse   806 DLLYQMCLQLWRDVIDSLVSQSLWLRNLLGLPEKETVYLDLPDEQGQKSPPVTESKVTSG 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lqfNP_729266.2 ENTH_epsin 28..149 CDD:239627 6/33 (18%)
UIM 208..227 CDD:197845 2/18 (11%)
MycbpapXP_006532001.1 MYCBPAP 241..658 CDD:373187 87/469 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834094
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.