DRSC/TRiP Functional Genomics Resources

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Protein Alignment ltl and MFHAS1

DIOPT Version :9

Sequence 1:NP_001261524.1 Gene:ltl / 38845 FlyBaseID:FBgn0268063 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_004216.2 Gene:MFHAS1 / 9258 HGNCID:16982 Length:1052 Species:Homo sapiens


Alignment Length:374 Identity:101/374 - (27%)
Similarity:167/374 - (44%) Gaps:41/374 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 LSNVTYLSIGDNDLDEIPKHALSHMPSLLTLDIGRCKIRAVQQEDFRGIQRVTNLILVSNIITRL 172
            |.::..|::|:|.|:|:|:...|.:.||..|.:.|.:...:..........:|.|.:..|.:|.|
Human    62 LGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTAL 126

  Fly   173 --DRGSFPKSLLILHLGRNQLESLNGSLHDLHNLESLFINANNITSLDDELPDGGQLRLLMAHNN 235
              :..|..:.|..|:|..|||.:|...|..|.:||.|.::.|.:..|.|.|....:||.|...:|
Human   127 GAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHN 191

  Fly   236 RLERLPANMAGMHSLETVHIHCNQLRSFDRVLRNAVNLSEVMADNNELEYLAQDEFASCSKVETL 300
            :|...|..:..:.:||.:.:..|:||.....:.....|..:.....||..|... |...:.:|:|
Human   192 QLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAG-FCELASLESL 255

  Fly   301 QMGCNHIKSLNSSLLPILKLKNANFSFNDIEEFSMAELHGLRSLKTLQLSSNRIQRLLPDPRGVQ 365
            .:..|.:::|.:....:.:||..|.|.|..|||..|                    ||| ..|::
Human   256 MLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAA--------------------LLP-LAGLE 299

  Fly   366 ELMLVNLDLDNNRIDSLNGALAGLGNLRILNLAGNRLEHLQVGDFDGMIRLDILD---LTGNQLA 427
            ||.     |..|::.|:...::|||.|..|.|..||:.:|.    |.::.|..|:   |.|||:|
Human   300 ELY-----LSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLP----DSIVELTGLEELVLQGNQIA 355

  Fly   428 ELKPLEMTLLPSLKILKVAYNNITK--LEQDFKGLPVLC--QANLTNNQ 472
            .| |.....|..:.:.|:..|.:.:  .|...||:|.:.  |..|.::|
Human   356 VL-PDHFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAYQKELAHSQ 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ltlNP_001261524.1 leucine-rich repeat 65..86 CDD:275380
LRR_8 86..145 CDD:290566 12/36 (33%)
leucine-rich repeat 87..110 CDD:275380 1/1 (100%)
leucine-rich repeat 111..134 CDD:275380 7/22 (32%)
leucine-rich repeat 135..158 CDD:275380 3/22 (14%)
LRR_8 158..214 CDD:290566 19/57 (33%)
leucine-rich repeat 159..180 CDD:275380 6/22 (27%)
leucine-rich repeat 181..203 CDD:275380 9/21 (43%)
leucine-rich repeat 204..226 CDD:275380 7/21 (33%)
LRR_RI 226..451 CDD:238064 60/227 (26%)
leucine-rich repeat 227..249 CDD:275380 6/21 (29%)
leucine-rich repeat 250..272 CDD:275380 5/21 (24%)
leucine-rich repeat 273..296 CDD:275380 5/22 (23%)
leucine-rich repeat 297..315 CDD:275380 4/17 (24%)
LRR_8 319..402 CDD:290566 25/82 (30%)
leucine-rich repeat 320..335 CDD:275378 8/14 (57%)
leucine-rich repeat 344..366 CDD:275380 4/21 (19%)
leucine-rich repeat 367..391 CDD:275380 6/23 (26%)
LRR_8 369..426 CDD:290566 18/59 (31%)
leucine-rich repeat 392..415 CDD:275380 7/22 (32%)
leucine-rich repeat 416..439 CDD:275380 10/25 (40%)
LRR_8 438..>479 CDD:290566 9/39 (23%)
leucine-rich repeat 440..462 CDD:275380 5/23 (22%)
leucine-rich repeat 463..483 CDD:275380 3/12 (25%)
MFHAS1NP_004216.2 Required for interaction with PPP2R2A. /evidence=ECO:0000269|PubMed:28609714 64..649 100/372 (27%)
Required for interaction with PJA2. /evidence=ECO:0000269|PubMed:28471450 64..364 90/331 (27%)
leucine-rich repeat 68..88 CDD:275380 7/19 (37%)
LRR_8 88..147 CDD:290566 14/58 (24%)
leucine-rich repeat 89..112 CDD:275380 3/22 (14%)
leucine-rich repeat 113..136 CDD:275380 6/22 (27%)
LRR_RI 124..354 CDD:238064 72/260 (28%)
leucine-rich repeat 137..182 CDD:275380 16/44 (36%)
LRR_8 159..216 CDD:290566 16/56 (29%)
leucine-rich repeat 160..173 CDD:275380 4/12 (33%)
leucine-rich repeat 183..205 CDD:275380 6/21 (29%)
leucine-rich repeat 206..228 CDD:275380 5/21 (24%)
leucine-rich repeat 229..251 CDD:275380 5/22 (23%)
LRR_8 251..308 CDD:290566 21/82 (26%)
leucine-rich repeat 252..274 CDD:275380 4/21 (19%)
leucine-rich repeat 275..297 CDD:275380 12/42 (29%)
LRR_8 297..354 CDD:290566 21/65 (32%)
leucine-rich repeat 298..320 CDD:275380 7/26 (27%)
leucine-rich repeat 321..343 CDD:275380 8/25 (32%)
leucine-rich repeat 344..364 CDD:275380 8/20 (40%)
P-loop_NTPase 409..>552 CDD:304359
COR 660..906 CDD:292713
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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