DRSC/TRiP Functional Genomics Resources

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Protein Alignment ltl and Lrrc15

DIOPT Version :10

Sequence 1:NP_729265.1 Gene:ltl / 38845 FlyBaseID:FBgn0268063 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_083249.1 Gene:Lrrc15 / 74488 MGIID:1921738 Length:579 Species:Mus musculus


Alignment Length:694 Identity:148/694 - (21%)
Similarity:241/694 - (34%) Gaps:240/694 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SPCTCE-------TGK---------AWN---------HV-ELSCEKLESFNAVV------DSLAN 55
            |.|||.       ||.         .||         |: ||..:|..:.:|::      :.|||
Mouse    27 SECTCSRASQVECTGAQIVAMPSPLPWNAMSLQILNTHITELPEDKFLNISALIALKMEKNELAN 91

  Fly    56 KL-----NADTNIDLKITHSQLDDLEMRSFTDMNFNLYKLRMQWNSLKSLPEVPFRGLSNVTYLS 115
            .:     |..:...|.:.:::|.:|.:|.|.|:| ||..|.:..|.|..:....|...||:..|.
Mouse    92 IMPGAFRNLGSLRHLSLANNKLKNLPVRLFQDVN-NLETLLLSNNQLVQIQPAQFSQFSNLKELQ 155

  Fly   116 IGDNDLDEIPKHALSHMPSLLTLDIGRCKIRAVQQEDFRGIQRVTNLILVSNIITRLDRGSFPK- 179
            :..|:|:.||:....|:..|..|::|......:....|:.:..:..|.|..|.::.:..|:|.. 
Mouse   156 LYGNNLEYIPEGVFDHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDAL 220

  Fly   180 -SLLILHLGRNQLESLN-GSLHDLHNLESLFINANNITSLDDELPDGGQLRLLMAHNNRLERLPA 242
             :|..|.|..||:.:|: |..|:..||:.|:::.|:|:    .||.|    :.|       :|| 
Mouse   221 GNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHIS----HLPPG----IFM-------QLP- 269

  Fly   243 NMAGMHSLETVHIHCNQLRSFDRVLRNAVNLSEVMADNNELEYLAQDEFASCSKVETLQMGCNHI 307
                         |.|:|..|                .|.|:.|:...|.....:..|.:..|||
Mouse   270 -------------HLNKLTLF----------------GNSLKELSPGVFGPMPNLRELWLYNNHI 305

  Fly   308 KSL-NSSLLPILKLKNANFSFNDIEEFSMAELHGLRSLKTLQLSSNRIQRLLPDPRGVQELM-LV 370
            .|| :::...:.:|:....|.|.:...|....:||.:|:.|.|.:|.:|.|  |....:.|. |.
Mouse   306 TSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQDL--DGNVFRSLANLR 368

  Fly   371 NLDLDNNRIDSLNGAL-AGLGNLRILNLAGNRLEHLQVGDFDGMIRLDILDLTGNQLAELKPLEM 434
            |:.|.|||:..|.|:: |.:..|..:.|..|.||:|.:|.||.:         ||          
Mouse   369 NVSLQNNRLRQLPGSIFANVNGLMTIQLQNNNLENLPLGIFDHL---------GN---------- 414

  Fly   435 TLLPSLKILKVAYNNITKLEQDFKGLPVLCQANLTNNQISTISSELVTNTRCKNHNVPGKLEIHL 499
                                        ||                               |:.|
Mouse   415 ----------------------------LC-------------------------------ELRL 420

  Fly   500 DDNPIMCDVGLNELCRLMAVQEARIRGRSQCFENDQEVCTVLPMLYNVNLPIMVTNLKLTGREVP 564
            .|||..||..:..|...:.:..||                    |....||:..:...:.|:.: 
Mouse   421 YDNPWRCDSNILPLHDWLILNRAR--------------------LGTDTLPVCSSPASVRGQSL- 464

  Fly   565 KPMVRVIVPSLIKANNELLPPLIATLGNPVLISTDLVNPVISPLPPPLLLATTTPPPPLPLPVES 629
                                         |:|:.:.                  |.|.:..|...
Mouse   465 -----------------------------VIINVNF------------------PGPSVQGPETP 482

  Fly   630 EVEKNESTTANPVPTNYTQETTTTTSTTTTTTTTETSSQVAPIE 673
            ||.....|::.|..|:.:..|..|.||....|...|   :.||:
Mouse   483 EVSSYPDTSSYPDSTSISSTTEITRSTDDDYTDLNT---IEPID 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ltlNP_729265.1 LRR 65..476 CDD:443914 99/416 (24%)
leucine-rich repeat 65..86 CDD:275380 7/20 (35%)
leucine-rich repeat 87..110 CDD:275380 5/22 (23%)
leucine-rich repeat 111..134 CDD:275380 6/22 (27%)
leucine-rich repeat 135..158 CDD:275380 4/22 (18%)
leucine-rich repeat 159..180 CDD:275380 5/22 (23%)
leucine-rich repeat 181..203 CDD:275380 8/22 (36%)
leucine-rich repeat 204..226 CDD:275380 7/21 (33%)
leucine-rich repeat 227..249 CDD:275380 3/21 (14%)
leucine-rich repeat 250..272 CDD:275380 4/21 (19%)
leucine-rich repeat 273..296 CDD:275380 4/22 (18%)
leucine-rich repeat 297..315 CDD:275380 6/18 (33%)
leucine-rich repeat 320..335 CDD:275378 3/14 (21%)
leucine-rich repeat 344..366 CDD:275380 7/21 (33%)
leucine-rich repeat 367..391 CDD:275380 10/25 (40%)
leucine-rich repeat 392..415 CDD:275380 9/22 (41%)
leucine-rich repeat 416..439 CDD:275380 2/22 (9%)
leucine-rich repeat 440..462 CDD:275380 0/21 (0%)
leucine-rich repeat 463..483 CDD:275380 2/19 (11%)
Lrrc15NP_083249.1 LRR_8 54..113 CDD:404697 11/58 (19%)
LRR 1 54..75 5/20 (25%)
leucine-rich repeat 58..78 CDD:275380 4/19 (21%)
LRR 2 78..99 4/20 (20%)
LRR 3 102..123 5/20 (25%)
LRR 103..>441 CDD:443914 107/463 (23%)
leucine-rich repeat 103..126 CDD:275380 7/23 (30%)
LRR 4 126..147 6/20 (30%)
leucine-rich repeat 127..150 CDD:275380 5/22 (23%)
LRR 5 150..171 6/20 (30%)
leucine-rich repeat 151..174 CDD:275380 6/22 (27%)
LRR 6 174..195 4/20 (20%)
leucine-rich repeat 175..198 CDD:275380 4/22 (18%)
LRR 7 198..219 5/20 (25%)
leucine-rich repeat 199..222 CDD:275380 5/22 (23%)
LRR 8 222..243 7/20 (35%)
leucine-rich repeat 223..246 CDD:275380 8/22 (36%)
LRR 9 246..267 9/35 (26%)
leucine-rich repeat 247..270 CDD:275380 10/51 (20%)
LRR 10 270..291 8/36 (22%)
leucine-rich repeat 271..294 CDD:275380 7/38 (18%)
LRR 11 294..315 6/20 (30%)
leucine-rich repeat 295..318 CDD:275380 6/22 (27%)
LRR 12 318..339 4/20 (20%)
leucine-rich repeat 319..342 CDD:275380 6/22 (27%)
LRR 13 342..363 7/22 (32%)
leucine-rich repeat 343..364 CDD:275380 7/22 (32%)
LRR 14 366..387 8/20 (40%)
leucine-rich repeat 367..387 CDD:275380 8/19 (42%)
LRR 15 390..411 8/20 (40%)
leucine-rich repeat 391..412 CDD:275380 9/20 (45%)
LRRCT 423..>462 CDD:214507 10/58 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 476..509 8/32 (25%)

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