DRSC/TRiP Functional Genomics Resources

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Protein Alignment ltl and Elfn2

DIOPT Version :10

Sequence 1:NP_729265.1 Gene:ltl / 38845 FlyBaseID:FBgn0268063 Length:817 Species:Drosophila melanogaster
Sequence 2:NP_898964.2 Gene:Elfn2 / 207393 MGIID:3608416 Length:823 Species:Mus musculus


Alignment Length:649 Identity:131/649 - (20%)
Similarity:217/649 - (33%) Gaps:210/649 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 DGGQLRLLMAHNNR--LERLPANMAGMHSLETVH---IHCNQLRSFDRVLRNAV----NLSEVMA 278
            |.|.:.|.:...|:  .|.:|     .|...|||   ::.|:|::   ||.:::    ||:::..
Mouse    30 DKGYVWLAICSQNQPPYETIP-----QHINSTVHDLRLNENKLKA---VLYSSLNRFGNLTDLNL 86

  Fly   279 DNNELEYLAQDEFASCSKVETLQMGCNHIKSLNSSLLPILKLKNANFSFNDIEEFSMAELHGLRS 343
            ..||:.|:....|...:.::.||:|.|.:.:|...:                       |.|:..
Mouse    87 TKNEISYIEDGAFLGQTSLQVLQLGYNRLSNLTEGM-----------------------LRGMSR 128

  Fly   344 LKTLQLSSNRIQRLLPDPRGVQEL-MLVNLDLDNNRIDSLNGA-LAGLGNLRILNLAGNRLEHLQ 406
            |:.|.:..|.|:  :..|....|. .|:::||.:||:..|:|| .|.|.:|.:..||||...   
Mouse   129 LQFLFVQHNLIE--VVTPTAFSECPSLISIDLSSNRLSRLDGATFASLASLMVCELAGNPFN--- 188

  Fly   407 VGDFDGMIRLDILDLTGNQLAELKPLEMTLLPSLKILKVAYNNITK--------LEQDFKGLPVL 463
                                     .|..|...|..| |.:||:||        ..::|.|.|: 
Mouse   189 -------------------------CECDLFGFLAWL-VVFNNVTKNYDRLQCESPREFAGYPL- 226

  Fly   464 CQANLTNNQISTISSELVTNTRCKNHNVPGKLEIHLDDNPIMCDVGLNELCRLMAVQEARIRGRS 528
                |......::::..|...:|:|.::|.:...|  ..|...|.             .|....:
Mouse   227 ----LVPRPYHSLNAITVLQAKCRNGSMPARPVSH--PTPYSTDA-------------QREPDEN 272

  Fly   529 QCFENDQEVCTVLPMLYNVNLPIMVTNLKLTGREVPKPMVRVIVPS-------LIKANNELLPPL 586
            ..| |..|:.:|.|...:.........:||.........:.||:|.       |::.||..... 
Mouse   273 SGF-NPDEILSVEPPASSTTDASAGPAIKLHQVTFTSATLVVIIPHPYSKMYVLVQYNNSYFSD- 335

  Fly   587 IATLGNPVLISTDLVNPVISPLPPPLLLATTTPPPPLPLPVESEVEKNESTTANPVPTNYTQETT 651
            :.||.|                                        |.|..|.:.:.. :|:.|.
Mouse   336 VMTLKN----------------------------------------KKEIVTLDKLRA-HTEYTF 359

  Fly   652 TTTSTTTT-----TTTTETSSQVAPIEIITTTAPTTTTTSTTTPKPNETLPVIVELQDPNPPDTT 711
            ..||...:     |..|.|:..:.|.::    ||:|:||:...                    .|
Mouse   360 CVTSLRNSRRFNHTCLTFTTRDLVPGDL----APSTSTTTHYI--------------------MT 400

  Fly   712 VNQTALVPPVVLDPLQQDLERERERERERELERDLDHEAVAKTEYE-----------TVEYIPNL 765
            :........:||..:...|   |:|..:.|.::.::   |.||..|           .|.....|
Mouse   401 ILGCLFGMVIVLGAVYYCL---RKRRMQEEKQKSVN---VKKTILEMRYGADVDAGSIVHAAQKL 459

  Fly   766 VQPPVGSDALTP----------PPSKA--NALEEDSESVHSNSVHAEYPHAAQSLQIPEEP-PE 816
            .:|||...|...          |.||.  ..|:....:...|.:......|..||..|||. ||
Mouse   460 GEPPVLPVARMSSIPSMVGEKLPASKGLEAGLDTPKVATKGNYIEVRTGAAGDSLARPEEELPE 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ltlNP_729265.1 LRR 65..476 CDD:443914 61/271 (23%)
leucine-rich repeat 65..86 CDD:275380
leucine-rich repeat 87..110 CDD:275380
leucine-rich repeat 111..134 CDD:275380
leucine-rich repeat 135..158 CDD:275380
leucine-rich repeat 159..180 CDD:275380
leucine-rich repeat 181..203 CDD:275380
leucine-rich repeat 204..226 CDD:275380 1/2 (50%)
leucine-rich repeat 227..249 CDD:275380 4/23 (17%)
leucine-rich repeat 250..272 CDD:275380 7/28 (25%)
leucine-rich repeat 273..296 CDD:275380 5/22 (23%)
leucine-rich repeat 297..315 CDD:275380 5/17 (29%)
leucine-rich repeat 320..335 CDD:275378 0/14 (0%)
leucine-rich repeat 344..366 CDD:275380 5/21 (24%)
leucine-rich repeat 367..391 CDD:275380 10/25 (40%)
leucine-rich repeat 392..415 CDD:275380 5/22 (23%)
leucine-rich repeat 416..439 CDD:275380 2/22 (9%)
leucine-rich repeat 440..462 CDD:275380 9/29 (31%)
leucine-rich repeat 463..483 CDD:275380 2/19 (11%)
Elfn2NP_898964.2 LRR 1 56..77 7/23 (30%)
LRR <60..>205 CDD:443914 43/201 (21%)
leucine-rich repeat 60..80 CDD:275378 4/22 (18%)
LRR 2 80..101 6/20 (30%)
leucine-rich repeat 81..104 CDD:275378 5/22 (23%)
LRR 3 104..125 6/43 (14%)
leucine-rich repeat 105..128 CDD:275378 7/45 (16%)
LRR 4 128..149 5/22 (23%)
leucine-rich repeat 129..152 CDD:275378 6/24 (25%)
LRR 5 152..173 8/20 (40%)
leucine-rich repeat 153..166 CDD:275378 5/12 (42%)
leucine-rich repeat 177..189 CDD:275378 5/39 (13%)
leucine-rich repeat 200..226 CDD:275380 8/26 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..294 10/60 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 590..624
Blue background indicates that the domain is not in the aligned region.

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