DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8539 and Cpb2

DIOPT Version :9

Sequence 1:NP_001261520.1 Gene:CG8539 / 38842 FlyBaseID:FBgn0035791 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_062749.2 Gene:Cpb2 / 56373 MGIID:1891837 Length:422 Species:Mus musculus


Alignment Length:304 Identity:89/304 - (29%)
Similarity:148/304 - (48%) Gaps:22/304 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 DNYLSYDGIMQYLDELALSHSNRVTLKDVARTYENRALKMAIITNGDGRPGKRVIFLDAALHSRE 100
            :.|.|.:.|..:::.:...|.:.:....:..::|...|.:..::..:.|. |..|::|..:|:||
Mouse   120 EQYHSLNEIYSWIEVITEQHPDMLQKIYIGSSFEKYPLYVLKVSGKEQRI-KNAIWIDCGIHARE 183

  Fly   101 WMTPAAALLTIHKLVVEF--AEN--SDLLTDYDWHIMPLANPDGYEYSRNTERYWRNTRTPNGGN 161
            |::||..|..| ..|.:|  .||  :.||...|::|||:.|.|||:|:....|.||..|:.:..|
Mouse   184 WISPAFCLWFI-GYVTQFHGKENLYTRLLRHVDFYIMPVMNVDGYDYTWKKNRMWRKNRSAHKNN 247

  Fly   162 -CFGTNLNRNFAVDWNVGFPELKDPCDENYAGSSPFSEVEARTVRDIMHGLVESKRAVMYLSLHT 225
             |.||:||||||.............|.|.|.|..|.||.|.:.|.|.:...::..:|  |:|:|:
Mouse   248 RCVGTDLNRNFASKHWCEKGASSSSCSETYCGLYPESEPEVKAVADFLRRNIDHIKA--YISMHS 310

  Fly   226 ANRSVFYPWVYDTDPVSNQKEHDEIGRFVADRILQSTGTFIKTWQYAKYAGTFG-----GTSMDY 285
            .::.:.:|:.|:.   |..|:|:|:. .||...:::..:..|..:|...:|:..     |.|.|:
Mouse   311 YSQQILFPYSYNR---SKSKDHEELS-LVASEAVRAIESINKNTRYTHGSGSESLYLAPGGSDDW 371

  Fly   286 ALLAGFPLSFVFEMSGTGRDHVEYKFFPPARDIRHLAEESWTGI 329
            ....|...||..|:..|||    |.|..|.|.|:....|:...|
Mouse   372 IYDLGIKYSFTIELRDTGR----YGFLLPERYIKPTCAEALAAI 411

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG8539NP_001261520.1 M14_CP_A-B_like 38..335 CDD:199844 89/302 (29%)