DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8539 and Cpa6

DIOPT Version :9

Sequence 1:NP_001261520.1 Gene:CG8539 / 38842 FlyBaseID:FBgn0035791 Length:385 Species:Drosophila melanogaster
Sequence 2:XP_038965675.1 Gene:Cpa6 / 312913 RGDID:1311764 Length:290 Species:Rattus norvegicus


Alignment Length:311 Identity:87/311 - (27%)
Similarity:141/311 - (45%) Gaps:43/311 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LSHSNR-----VTLKDVARTYENRALKMAIITNGDGRPG---KRVIFLDAALHSREWMTPAAALL 109
            :.|.|:     |.:..:.|::|.|:|.:..:    ||..   ||.:::|..:|:|||:.||....
  Rat     1 MHHLNQTQPGLVRVFPIGRSFEGRSLLIIQL----GRKSQVYKRAVWIDCGIHAREWIGPAFCQW 61

  Fly   110 TIHKLVVEFAEN---SDLLTDYDWHIMPLANPDGYEYSRNTERYWRNTRTPNGG-NCFGTNLNRN 170
            .:.:.::.:..:   ..:|....::|||:.|.|||.:|...:|:||.||:.|.. :|.|.:.|||
  Rat    62 FVKEAILTYKTDPAMRKMLNHLYFYIMPVLNVDGYHFSWTHDRFWRKTRSRNSKFHCRGVDANRN 126

  Fly   171 FAVDW-NVGFPELKDPCDENYAGSSPFSEVEARTVRDIMHGLVESKRAVMYLSLHTANRSVFYPW 234
            :.|.| :.|  ...||||:.|.|..|.||.|.:.|.:.:.  ...||...|||.|...:.:.||:
  Rat   127 WKVKWCDEG--ASADPCDDTYCGPFPESEPEVKAVANFLR--KHRKRIRAYLSFHAYAQMLLYPY 187

  Fly   235 VYDTDPVSNQKEHDEIGRF--------VADRILQST-GTFIKTWQYAKYAGTFGGTSMDYALLAG 290
            .|         :|..|..|        .|.:.|:|. |...:....::......|.|||:|...|
  Rat   188 SY---------KHATIPNFSCVEFAAHKAVKALRSVHGIRYRHGPASQTLYVSSGNSMDWAYKNG 243

  Fly   291 FPLSFVFEMSGTGRDHVEYKFFPPARDIRHLAEESWTGIKAFAEKTIEKYP 341
            .|.||.||:..||    .:.|..|...|:....|:...:|......::..|
  Rat   244 IPYSFAFELRDTG----YFGFLLPEMLIKPTCTETMLAVKNITMHLLKNCP 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8539NP_001261520.1 M14_CP_A-B_like 38..335 CDD:199844 86/303 (28%)
Cpa6XP_038965675.1 Peptidase_M14_like 1..289 CDD:416253 86/308 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351661
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2866
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D208397at33208
OrthoFinder 1 1.000 - - FOG0000056
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11705
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.850

Return to query results.
Submit another query.