DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8539 and ccpp-6

DIOPT Version :10

Sequence 1:NP_648130.2 Gene:CG8539 / 38842 FlyBaseID:FBgn0035791 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_495012.2 Gene:ccpp-6 / 184043 WormBaseID:WBGene00017136 Length:459 Species:Caenorhabditis elegans


Alignment Length:356 Identity:74/356 - (20%)
Similarity:128/356 - (35%) Gaps:131/356 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 VARTYENRALKMAIITNGDGRP-----GKRVIFLDAALHSREWMTPAAALLTIHKLVVEFAENSD 123
            :.:|.:.|.:.:..|   |..|     .|::|||.|.:|..|  :|::.::  |. ::||..:.|
 Worm   169 LVQTVQKRRVDLITI---DATPDTFQGSKKMIFLTARVHPGE--SPSSHVM--HG-IIEFLVSKD 225

  Fly   124 -----LLTDYDWHIMPLANPDG-----YEYS---RNTERYWRNTRTPNGGNCFGTNLNRNFAVDW 175
                 |...|.:.|:|:.||||     |..|   .:..|.|   |||:               ||
 Worm   226 DRAQKLRKVYCFKIIPMLNPDGVFLGNYRCSLMGHDLNRMW---RTPS---------------DW 272

  Fly   176 NVGFPELKDPCDENYAGSSPFSEVEARTVRDIMHGLVESKRA--VMYLSLHTANRSVFYPWVYDT 238
              ..|.:       ||            |::::.....:.:|  |:|:.||              
 Worm   273 --AHPSI-------YA------------VKNLLTQYDNNPQAQTVIYVDLH-------------- 302

  Fly   239 DPVSNQKEHDEIGRFVADRILQSTGTFIKTW--------------QYAKY------AGTFGGTSM 283
              ..:||.:..:...|....::...||.:.|              ::.::      |||...|..
 Worm   303 --AHSQKPNCFLYGNVNMSAVEEKSTFRQLWLPHLLADLSEDYSLEFTQFNTDVEKAGTGRRTMG 365

  Fly   284 DYALLAGFPLSFVF------EMSGTGRDH----VEYK--------------FFPPARDIRHLAEE 324
            |......:.|...|      :.||.|..|    ::||              |:.....:|.:..|
 Worm   366 DLLSCLCYTLEVSFFSYRHTDSSGNGIQHCTPYLQYKYEALGEAFCRALLNFYEADCGLREIVLE 430

  Fly   325 S--WTGIKAFAEKTIEKYPPSRVISYNPMVK 353
            .  .|.:.|.|:||::|  .:|.:....|:|
 Worm   431 RPFKTFLPARAQKTLKK--QARKVIQTVMMK 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8539NP_648130.2 Zn_pept 38..322 CDD:214748 64/321 (20%)
ccpp-6NP_495012.2 Pepdidase_M14_N 21..140 CDD:407865
M14_AGBL4_like 162..418 CDD:349479 62/311 (20%)
Blue background indicates that the domain is not in the aligned region.

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