DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d8 and AT5G08250

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_001330676.1 Gene:AT5G08250 / 830721 AraportID:AT5G08250 Length:550 Species:Arabidopsis thaliana


Alignment Length:565 Identity:123/565 - (21%)
Similarity:241/565 - (42%) Gaps:120/565 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LFLL----VVLLFGAGWIIHLGQADRRRKVANLPGPICPPLIGAMQLMLRLNPKTFIKVGREYVL 63
            ||.|    ::.||.|.::.....:.|::|...:|   ..||:|.:        .:.|...|..:.
plant    31 LFSLRDVQILELFIAFFVFATIHSLRQKKHQGMP---VWPLVGML--------PSLISAVRSNIY 84

  Fly    64 KFGHLQRVWIFNRLLIMSGDAELNEQLLS-----------SQEHLVK--HPVY-------KVLGQ 108
            :       |:.:.|:..:|.........|           :.|||:|  ..:|       :.:..
plant    85 E-------WLSDVLISQNGTFRFRGPWFSTLNCVVTCDPRNVEHLLKTRFSIYPKGSYFRETMQD 142

  Fly   109 WLGNGLLLSDGKVWHQRRKIITPTFHFSILEQ-------------FVEVFDQQSNICVQRLAQKA 160
            .||:|:..:|...|.::||..:..||.:...|             .:.|.:....|.:|.:..:.
plant   143 LLGDGIFNTDDGTWQRQRKAASVEFHSAKFRQLTSQSLHELVHNRLLPVLETSGKIDLQDILLRL 207

  Fly   161 NGNTFDVYRSICAAALDIIAETAMGTKIYAQANESTPYAEAVNECTALLSWRFMSVYLQVELLFT 225
               |||   ::|..|.. :....:..|:     ...|:|:|..:.|.....||:.          
plant   208 ---TFD---NVCMIAFG-VDPGCLSPKL-----PEIPFAKAFEDATEATVVRFVM---------- 250

  Fly   226 LTHPHLKWRQTQLIRTMQEFTIKVIEKRRQALEDQQSKLMDTADEDVGSKRRMA----LLDVLL- 285
               |...|:   |:|::...|.|.:::....::|...:::.|..:::..:..:|    ||.:.: 
plant   251 ---PKFVWK---LMRSLNLGTEKKLKESINGVDDFAEEVIRTRKKEMSLETEIAKRPDLLTIFMG 309

  Fly   286 MSTVDGRPLTNDEIREEVDTFMFEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVL------- 343
            :...:|:..::..:|:....|:..|.||::.|||:....:.::|||:.|::..|.::|       
plant   310 LRDENGQKFSDKFLRDICVNFILAGRDTSSVALSWFFWLIEKNPEVEEKIMMGICKILEQRVDHG 374

  Fly   344 GTDRS-------RPVSIRDLGELKYMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDGV-IP 400
            .|.::       ||..|:   ::.|::..:.|:||:||.||:..:::..|     .|..||. :.
plant   375 DTKKNMEYEPVFRPEEIK---KMDYLQAALSETLRLYPSVPVDHKEVLED-----DVFPDGTKLK 431

  Fly   401 AGSEIIIGIFGVHRQPETFPNPD--EFIPERHENGSRV---APFKMIPFSAGPRNCIGQKFAQLE 460
            .|.::|..|:.:.|. ||....|  ||.|||.....|.   :.:|...|:.|||.|:|:.||..:
plant   432 KGEKVIYAIYAMGRM-ETIWGKDCREFKPERWLRDGRYMSESAYKFTAFNGGPRLCLGKDFAYYQ 495

  Fly   461 MKMMLAKIVREYELL---PMGQRVECIVNIVLRSETGFQLGMRKR 502
            |:.:.|.|:..|::.   ..|.:||..:.:.:..:.|.::.|.||
plant   496 MRYVAAAIIYRYKVRVDDKGGHKVEPKMALTMYMKHGLKVNMVKR 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 106/491 (22%)
AT5G08250NP_001330676.1 CYP86A 98..533 CDD:410687 102/471 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 151 1.000 Domainoid score I1385
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8393
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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