DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d8 and CPD

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_196188.1 Gene:CPD / 830453 AraportID:AT5G05690 Length:472 Species:Arabidopsis thaliana


Alignment Length:496 Identity:121/496 - (24%)
Similarity:227/496 - (45%) Gaps:75/496 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FLLVVLLFGAGWIIHLGQADRRRKVANLPGPICPPLIG-AMQLM---LRLNPKTFIKVGREYVLK 64
            |||::....||:::.| :..|.|::...||.:..|||| ..||:   ...||:.||.   |.|.:
plant     6 FLLLLSSIAAGFLLLL-RRTRYRRMGLPPGSLGLPLIGETFQLIGAYKTENPEPFID---ERVAR 66

  Fly    65 FGHLQRVWIFNRLLIMSGDAELNEQLLSSQEHLVK--HP--VYKVLGQWLGNGLLLSDGKVWHQR 125
            :|.:....:|....|.|.|.|.|..:|.::..|.:  :|  :..:||:   :.|||..|.: |:|
plant    67 YGSVFMTHLFGEPTIFSADPETNRFVLQNEGKLFECSYPASICNLLGK---HSLLLMKGSL-HKR 127

  Fly   126 RKIITPTF-HFSILEQFVEV-------FDQQSNICVQRLAQKANGNTFDVYRSICAAALDIIAET 182
            ...:|.:| :.||::..:.:       |:..|......|.::|...||::               
plant   128 MHSLTMSFANSSIIKDHLMLDIDRLVRFNLDSWSSRVLLMEEAKKITFEL--------------- 177

  Fly   183 AMGTKIYAQANESTPYAEAVNECTALLSWRFMSVYLQVELLFTLTHPHLKWRQTQLIRTMQEFTI 247
               |.....:.:...::|::.:...|:...|.|:.|.   ||:.|:.    :..|..|.:.|...
plant   178 ---TVKQLMSFDPGEWSESLRKEYLLVIEGFFSLPLP---LFSTTYR----KAIQARRKVAEALT 232

  Fly   248 KVIEKRRQALEDQQSKLMDTADEDVGSKRRMALLDVLLMSTVDGRPLTNDEIREEVDTFMFEGHD 312
            .|:.|||:             :|:.|::|:..:|..||.:. ||  .:::||.:.:...:..|::
plant   233 VVVMKRRE-------------EEEEGAERKKDMLAALLAAD-DG--FSDEEIVDFLVALLVAGYE 281

  Fly   313 TTTSALSFCLHELSRHPEVQAKMLE--EIVQVLGTDRSRPVSIRDLGELKYMECVIKESLRMYPP 375
            ||::.::..:..|:..|...|::.|  |.::.:.:| |..:...|...:.:.:||:.|:||:...
plant   282 TTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSD-SYSLEWSDYKSMPFTQCVVNETLRVANI 345

  Fly   376 VPIVGRKLQTDFKYTHSVHGDGVIPAGSEIIIGIFGVHRQPETFPNPDEFIPERHENGS-RVAPF 439
            :..|.|:..||.:    :.| ..||.|.::......||..|..|.:...|.|.|.::.| ...|.
plant   346 IGGVFRRAMTDVE----IKG-YKIPKGWKVFSSFRAVHLDPNHFKDARTFNPWRWQSNSVTTGPS 405

  Fly   440 KMI-PFSAGPRNCIGQKFAQLEMKMMLAKIVREYELLPMGQ 479
            .:. ||..|||.|.|.:.|::.:.:.|.::|..:..:|..|
plant   406 NVFTPFGGGPRLCPGYELARVALSVFLHRLVTGFSWVPAEQ 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 99/430 (23%)
CPDNP_196188.1 p450 1..472 CDD:386267 121/496 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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