DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d8 and AT3G44970

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_190083.2 Gene:AT3G44970 / 823632 AraportID:AT3G44970 Length:479 Species:Arabidopsis thaliana


Alignment Length:505 Identity:117/505 - (23%)
Similarity:203/505 - (40%) Gaps:103/505 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LFLLVVLLFGAGWIIHLGQADRRRKVANL-PGPICPPLIGAMQLMLRLNPKTFIKVG---REYVL 63
            :.:|||...|..|.    |....:....| ||.:..|:||  :.:....|..|.::.   ::.:|
plant    11 VIVLVVARVGHWWY----QWSNPKSNGKLPPGSMGFPIIG--ETLDFFKPYGFYEISPYLKKKML 69

  Fly    64 KFGHLQRVWIFNRLLIMSGDAELNEQLL--SSQEHLVKHP--VYKVLGQWLGNGLLLSDGKVWHQ 124
            ::|.|.|..|.....::|.|.::|.::|  .::..::.:|  :.|.||:   :.|.|..|.: |:
plant    70 RYGPLFRTNILGVKTVVSTDKDVNMEILRQENKSFILSYPDGLMKPLGK---DSLFLKIGNI-HK 130

  Fly   125 RRKIITPTFHFSILEQFV-EVFDQQSNICVQRLAQKANGNTFDVYRSICAAALDIIAETAMGTKI 188
            ..|.|  |.|....|... ::......:..:.|:.||.....||        .|.:::..:....
plant   131 HIKQI--TLHLLSSEGLKRKILKDMDRVTREHLSSKAKTGRLDV--------KDAVSKLIIAHLT 185

  Fly   189 YAQANESTPYAEAVNECTALLSWRFMSVYLQVELLFTLTHPHLKWRQTQLI-------------- 239
            ....:...|..:|          :.|.::    ..||     ..|.:|..:              
plant   186 PKMMSNLKPQTQA----------KLMGIF----KAFT-----FDWFRTSYLISAGKGLYNTLWAC 231

  Fly   240 -RTMQEFTIKVIEKRRQALEDQQSKLMDTADEDVGSKRRMALLDVLLMSTVDGRPLTNDEIREEV 303
             ..|:|  ||.|...|:..|::....::||.|:               |...|..|..:.|...:
plant   232 REGMRE--IKDIYTMRKTSEEKYDDFLNTAIEE---------------SEKAGELLNENAIITLI 279

  Fly   304 DTFMFEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGT--DRSRPVSIRDL-GELKYMECV 365
            .|......|||:.|:...:..|..:|:|.|::.:|...:|.:  |:...|:..:. .::.:...|
plant   280 FTLSCVTQDTTSKAICLAVKFLLENPKVLAELKKEHEVILESREDKEGGVTWEEYRHKMTFTNMV 344

  Fly   366 IKESLRMYPPVPIVGRKLQTDFK---YTHSVHGDGVIPAGSEIIIGIFGVHRQPETFPNPDEFIP 427
            |.||||:....|::.||...|.:   ||        ||||..::|....||..||.:.||.||.|
plant   345 INESLRITNLAPMLFRKAVKDVEIKGYT--------IPAGWIVMIIPSVVHFDPEIYENPFEFNP 401

  Fly   428 ERHEN-----GSRVAPFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREY 472
            .|.|.     ||:.    .:.|..|.|.|.|.:||:|::.:.|..:|..|
plant   402 WRWEGKELRAGSKT----FMVFGTGLRQCAGAEFARLQISVFLHHLVTTY 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 102/438 (23%)
AT3G44970NP_190083.2 p450 34..475 CDD:299894 111/478 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.