DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d8 and cyp46a1.3

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_001027517.1 Gene:cyp46a1.3 / 613109 XenbaseID:XB-GENE-969052 Length:504 Species:Xenopus tropicalis


Alignment Length:540 Identity:148/540 - (27%)
Similarity:263/540 - (48%) Gaps:96/540 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLFLLVVLLFGAGWI--IHLGQADRRRKVANLPGPICPP----LIGAMQLMLRLNPKTFIKVGR 59
            :|..:|:..|..:|:|  ||:       |..::||   ||    .:|....||||.....:....
 Frog    14 LLALILICFLLFSGYIHYIHM-------KYDHIPG---PPRDSFFLGHSPTMLRLMKNNLLMYDH 68

  Fly    60 --EYVLKFGHLQRVWIFNRLLIMSGDAELNEQLLSSQEHLVKHPVYKVLG-----QWLGNGLLLS 117
              .:|.|:|.:.|:...:|::|:....|..::||.|.:: .|...|.|:.     :::|.||:..
 Frog    69 FLGWVQKYGPVVRINGLHRVIILVVSPEAVKELLMSPKY-SKDKFYDVIANMFGVRFMGKGLVTD 132

  Fly   118 -DGKVWHQRRKIITPTFHFSILEQFVEVFDQQSNICVQRLAQKANGN-TFDVYRSICAAALDIIA 180
             |...||::|:|:.|.|..:.|...:..|::::...:::|.:||:|. ...::..:....||:|.
 Frog   133 RDYDHWHKQRRIMDPAFSRTYLMGLMGPFNEKAEELMEKLMEKADGKCEIKMHDMLSRLTLDVIG 197

  Fly   181 ETAMGTKIYAQANESTPYAEAVNECTALLSWRFMSVYLQVELLFTLTHPHLKWRQTQ--LIRTMQ 243
            :.|.|.::.:..::.||:.:|::              |.::.:..:.:|.:::...:  .||.:|
 Frog   198 KVAFGMELNSLNDDLTPFPKAIS--------------LVMKGIVEMRNPMVRYSLAKRGFIRKVQ 248

  Fly   244 EFTIKVIEKR-RQALEDQQSKLMDTADEDVGSKRRMALLDVLLMSTVDGRPLTNDEIREEVD--- 304
            | :|:::.:. ::.:|.:|.::.|..:..|         |:|.      :.|....:.||.|   
 Frog   249 E-SIRLLRQTGKECIERRQKQIQDGEEIPV---------DILT------QILKGAAMEEECDPEI 297

  Fly   305 ------TFMFEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELKYME 363
                  ||...|.:||.:.|||.:.||.|:||:..|...||.:|:|:  .|.:...|||:|:|:.
 Frog   298 LLDNFVTFFIAGQETTANQLSFVVMELGRNPEILEKAQAEIDEVIGS--KRDIEYEDLGKLQYLS 360

  Fly   364 CVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDGV-IPAGSEIIIGIFGVHR------QPETFPN 421
            .|:||:||:||..|...|.|..|...      ||| :|....|::..:.:.|      .|.|| |
 Frog   361 QVLKETLRLYPTAPGTSRGLTEDMVI------DGVKVPENVTIMLNSYIMGRMEQYYSDPLTF-N 418

  Fly   422 PDEFIPERHENGSRVAP---FKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYEL-LPMGQRVE 482
            ||.|.|:        ||   :...|||.|||:||||.|:|:|.|:::||:::.||. |..||..:
 Frog   419 PDRFSPD--------APKPYYSYFPFSLGPRSCIGQVFSQMEAKVVMAKLLQRYEFELAEGQSFK 475

  Fly   483 CIVNIVLRSETGFQLGMRKR 502
            .:....||...|....:|.|
 Frog   476 ILDTGTLRPLDGVICRLRPR 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 127/460 (28%)
cyp46a1.3NP_001027517.1 p450 40..491 CDD:306555 138/501 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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