DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d8 and cyp46a1.1

DIOPT Version :10

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_001018358.1 Gene:cyp46a1.1 / 553543 ZFINID:ZDB-GENE-050522-464 Length:501 Species:Danio rerio


Alignment Length:527 Identity:149/527 - (28%)
Similarity:248/527 - (47%) Gaps:77/527 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LLFLLVVLLFGAG-----WIIHLGQADRRRKVANLPGPICPP----LIGAMQLMLR-------LN 50
            ::|.|:..:|.|.     :|.||.|     |..::||   ||    |:|....:.:       |.
Zfish     9 IVFFLLAAVFTAFLGYCLYIHHLHQ-----KYDHIPG---PPRDSFLLGHSSSLTKAVYSDNNLI 65

  Fly    51 PKTFIKVGREYVLKFGHLQRVWIFNRLLIMSGDAELNEQLLSSQEHLVKHP-VYKVL-----GQW 109
            ...|:    .:..|:|.:.|:...:.:.||....|..:.::.|.:: :|.| |||.|     .::
Zfish    66 HDLFL----HWAEKYGPVYRINTLHYVTIMVYCPEATKTIMMSPKY-IKDPFVYKQLFNLFGKRF 125

  Fly   110 LGNGLLLS-DGKVWHQRRKIITPTFHFSILEQFVEVFDQQSNICVQRLAQKANGNTFDVYRSIC- 172
            |||||:.: |..:|:::|:|:.|.|..:.|...:..||:.|...:.:|.:.||..|..|...:. 
Zfish   126 LGNGLITAVDHDMWYRQRRIMDPAFSSTYLRSLISTFDEMSERLMDKLEEMANNKTPAVMHDLVN 190

  Fly   173 AAALDIIAETAMGTKIYAQANESTPYAEAVNECTALLSWRFMSVYLQVELLFTLTHPHLKWRQTQ 237
            ...||:|.:.|.|..:.....:.:|:..||..|       ...:.|.|...|....|. .|:..|
Zfish   191 CVTLDVICKVAFGVDLNLLNQKDSPFQNAVELC-------LKGMILDVRDPFFRLFPK-NWKLIQ 247

  Fly   238 LIRTMQEFTIKV----IEKRRQALEDQQSKLMDTADEDVGSKRRMALLDVLLMSTVDGRPLTNDE 298
            .:|...|...|.    |:.|:.|:::         .|||...    :|..:|.|..:.......:
Zfish   248 QVREATELLRKTGEKWIQNRKTAVKN---------GEDVPKD----ILTQILKSAEEENVNNTQD 299

  Fly   299 IREEVD---TFMFEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELK 360
            :.:.:|   ||...|.:||.:.|||.:..|.|:||:..:...|:.:||||  .|.:|..|||:|.
Zfish   300 LEQMLDNFVTFFIAGQETTANQLSFAIMALGRNPEIYKRAKAEVDEVLGT--KREISNEDLGKLT 362

  Fly   361 YMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDGV-IPAGSEIIIGIFGVHRQPETFPNPDE 424
            |:..|:||:||:||..|...|.|..|...      :|: :|.|..::...:...|..:.|.:|.:
Zfish   363 YLSQVLKETLRLYPTAPGTNRWLHEDIVI------NGIKVPRGCSVMFSSYVSQRLEKFFKDPLK 421

  Fly   425 FIPERHENGSRVAPFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVR--EYELLPMGQRVECIVNI 487
            |.|||.:..:....:...|||.|||.|:||.|||:|.|::|||:::  |:.|:| ||..:...|.
Zfish   422 FDPERFDVNAPKPYYCYYPFSLGPRTCLGQVFAQMEAKLVLAKLLQRFEFSLVP-GQSFDIKDNG 485

  Fly   488 VLRSETG 494
            .||.::|
Zfish   486 TLRPKSG 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 131/447 (29%)
cyp46a1.1NP_001018358.1 CYP46A1-like 66..495 CDD:410706 133/462 (29%)

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