DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d8 and cyp4b1.2

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_001017348.1 Gene:cyp4b1.2 / 550102 XenbaseID:XB-GENE-963387 Length:515 Species:Xenopus tropicalis


Alignment Length:523 Identity:165/523 - (31%)
Similarity:260/523 - (49%) Gaps:62/523 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLFLLVVLLFGAGWIIHLGQADRRRKVANL---PGPICPPLIGAMQLMLRLNPKTFIKVGRE-- 60
            :||.|....|:..|          ||..|.|   |||....|.|        :...|.:.|::  
 Frog    31 VLLLLKAYALYSRG----------RRFAAALVPFPGPPAHWLYG--------HVNQFRRDGKDLD 77

  Fly    61 ----YVLKFGHLQRVWI---FNRLLIMSGDAELNEQLLSSQEHLVKHPVYKVLGQWLGNGLLLSD 118
                :|.|:.:...:||   |..|:|...|   ..:::..:........|..|..|:|.|||:..
 Frog    78 RLMVWVNKYPNAFPLWIGKFFGTLIITDPD---YAKVVFGRSDPKTSTGYNFLVPWIGKGLLILS 139

  Fly   119 GKVWHQRRKIITPTFHFSILEQFVEVFDQQSNICVQRLAQKAN-GNTFDVYRSICAAALDIIAET 182
            |..|.|.|::|||.||:.:|:.:|.:....:.|.:..|...:| ..:.::::.:....||.|.:.
 Frog   140 GNTWFQHRRLITPGFHYDVLKPYVSLISDSTKIMLDELDVYSNKDESVELFQHVSLMTLDSIMKC 204

  Fly   183 AMGTKIYAQANESTPYAEAVNECTALLSWRFMSVYLQVELLFTLTHPHLKWRQTQLIRTMQEFTI 247
            |.......|.::...|.:||.:.:.|...|..:......|::.|: || .:|..:..|.:...|.
 Frog   205 AFSYHSNCQTDKDNDYIQAVYDLSWLTQQRIRTFPYHSNLIYFLS-PH-GFRFRKACRIVHLHTD 267

  Fly   248 KVIEKRRQALEDQQSKLMDTADEDVGSKRRMALLDVLLMS-TVDGRPLTNDEIREEVDTFMFEGH 311
            |||.:|::.||.::..      |.|..||.:..||:||.| ..:|:.|:::::|.||||||||||
 Frog   268 KVIGQRKKLLESKEEL------EKVQKKRHLDFLDILLCSKDENGQGLSHEDLRAEVDTFMFEGH 326

  Fly   312 DTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELKYMECVIKESLRMYPPV 376
            |||:|.:|:.|:.::.|||.|.|..|||.:.||  ..:.:...||..:.|....||||||:||||
 Frog   327 DTTSSGISWILYCMATHPEHQQKCREEISEALG--ERQTMEWDDLNRMPYTTMCIKESLRLYPPV 389

  Fly   377 PIVGRKLQTDFKYTHSVHGDGVIPAGSEIIIGIFGVHRQPETFPNPDEFIPERH--ENGSRVAPF 439
            |.|.|:|.....:    |....:|||..:.:.|:.:||.|..:.:|:.|.|.|.  ||.|:....
 Frog   390 PSVSRELAKPITF----HDGRSLPAGMLVSLQIYAIHRNPNVWKDPEIFDPLRFSPENSSKRHSH 450

  Fly   440 KMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYELL------PMGQRVECIVNIVLRSETGFQLG 498
            ..:||:|||||||||.||..|||:.:|..::.:||.      |:.|     ..:||||:.|..:.
 Frog   451 AFVPFAAGPRNCIGQNFAMNEMKVAVALTLKRFELSPDLSKPPLKQ-----PQLVLRSKNGIHVY 510

  Fly   499 MRK 501
            ::|
 Frog   511 LKK 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 146/443 (33%)
cyp4b1.2NP_001017348.1 p450 55..508 CDD:278495 155/482 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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