DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d8 and Cyp4f40

DIOPT Version :10

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_001102830.1 Gene:Cyp4f40 / 503122 RGDID:1559596 Length:523 Species:Rattus norvegicus


Alignment Length:405 Identity:143/405 - (35%)
Similarity:219/405 - (54%) Gaps:25/405 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 YKVLGQWLGNGLLLSDGKVWHQRRKIITPTFHFSILEQFVEVFDQQSNICVQRLAQKANGNT--F 165
            |..|..|||:|||:|....|.:.|.::||.|||:||:.:|::|:..:||...:..:.|:|.:  .
  Rat   125 YSFLKPWLGDGLLVSASDKWSRHRSMLTPAFHFNILKPYVKIFNDSTNIMHAKWLRLASGGSAHL 189

  Fly   166 DVYRSICAAALDIIAETAMGTKIYAQANESTPYAEAVNECTALLSWRFMSVYLQVELLFTLTHPH 230
            |::.:|....||.:.:.........|...| .|..|:.|.:||:..|...:.|.::||:.||...
  Rat   190 DMFENISLMTLDTLQKCVFSFNSNCQEKPS-EYIAAILELSALVVKRNEQLLLHMDLLYRLTPDG 253

  Fly   231 LKWRQTQLIRTMQEFTIKVIEKRRQALEDQQSKLMDTADEDV----GSKRRMALLDVLLMS-TVD 290
            .::.:.  ...:.:||..||::||:.|...       ..:||    ...:.:..:||||:| ..|
  Rat   254 RRFYKA--CHLVHDFTYAVIQERRRTLPKH-------GGDDVIKAKAKSKTLDFIDVLLLSKDED 309

  Fly   291 GRPLTNDEIREEVDTFMFEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRD 355
            |:.|::::||.|.|||||||||||.|.||:.|:.|::|||.|.:..:|:.::|....|..:...|
  Rat   310 GKELSDEDIRAEADTFMFEGHDTTASGLSWILYNLAKHPEYQERCRQEVQELLRDRDSEEIEWDD 374

  Fly   356 LGELKYMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDG-VIPAGSEIIIGIFGVHRQPETF 419
            |.:|.::...||||||::|||.:|.|....|....     || |||.|...||.||..|..|..:
  Rat   375 LAQLPFLTMCIKESLRLHPPVTMVSRCCTQDISLP-----DGRVIPKGIICIINIFATHHNPTVW 434

  Fly   420 PNPDEFIPERH--ENGSRVAPFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYELLPMGQRVE 482
            .:|:.:.|.|.  ||....:|...|||||||||||||.||..|||:.:|..:..:.:||..:...
  Rat   435 QDPEVYDPFRFDPENIQARSPLAFIPFSAGPRNCIGQTFAMNEMKVAVALTLLRFRVLPDDKEPR 499

  Fly   483 CIVNIVLRSETGFQL 497
            ....::||:|.|..|
  Rat   500 RKPELILRAEDGLWL 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 142/403 (35%)
Cyp4f40NP_001102830.1 CYP4F 74..515 CDD:410772 143/405 (35%)

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