DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d8 and Cyp4f17

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_001178915.1 Gene:Cyp4f17 / 500801 RGDID:1561655 Length:524 Species:Rattus norvegicus


Alignment Length:474 Identity:160/474 - (33%)
Similarity:244/474 - (51%) Gaps:62/474 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 RVWIFNRLLIMSGDAELNEQLLSSQEHLVK-----------------HP---------------- 101
            |.|.:..|.::..:.| ..|||:...|..:                 ||                
  Rat    57 RHWFWGHLNLVKNNEE-GLQLLAEMSHQFQDIHLCWIGIFYPILRLIHPKFIGPILQAPAAVAPK 120

  Fly   102 ---VYKVLGQWLGNGLLLSDGKVWHQRRKIITPTFHFSILEQFVEVFDQQSNIC---VQRLAQKA 160
               .|..|..|||:|||:|.|:.|.::|:::||.|||.||:.:|:.|::..||.   .|||..|.
  Rat   121 EMIFYGFLKPWLGDGLLVSAGEKWSRQRRLLTPAFHFDILKPYVKNFNKSVNIMHAKWQRLTAKG 185

  Fly   161 NGNTFDVYRSICAAALDIIAETAMGTKIYAQANESTPYAEAVNECTALLSWRFMSVYLQVELLFT 225
            :.. .|::..|....||.:.:.........|.:.| .|..|:.|.::|:..|....:|.::.|:.
  Rat   186 SAR-LDMFEHISLMTLDSLQKCVFSFDSNCQESPS-EYIAAIQELSSLIVKRHHQPFLYMDFLYY 248

  Fly   226 LTHPHLKWRQTQLIRTMQEFTIKVIEKRRQALEDQQSKLMDTADEDVGSK---RRMALLDVLLMS 287
            ||....::|:.  ...:..||..||.:||:.|..|      :.||.:.||   :.:..:||||::
  Rat   249 LTADGRRFRKA--CDLVHNFTDAVIRERRRTLSSQ------SVDEFLKSKTKSKTLDFIDVLLLA 305

  Fly   288 TVD-GRPLTNDEIREEVDTFMFEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPV 351
            ..: |:.|::::||.|.|||||.|||||.||||:.|:.|:||||.|.:..:|:.::|.......:
  Rat   306 KDEHGKELSDEDIRAEADTFMFGGHDTTASALSWILYNLARHPEHQERCRQEVRELLRDREPEEI 370

  Fly   352 SIRDLGELKYMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDG-VIPAGSEIIIGIFGVHRQ 415
            ...||.:|.::...||||||::|||.::.|....|.     |..|| |||.|::.||.|||||..
  Rat   371 EWDDLTQLPFLTMCIKESLRLHPPVTVISRCCTQDV-----VLPDGRVIPKGNDCIISIFGVHHN 430

  Fly   416 PETFPNPDEFIPER--HENGSRVAPFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYELLPMG 478
            |..:|:|:.:.|.|  .||..:.:|...|||||||||||||.||..|||:.:|..:..:.|||..
  Rat   431 PSVWPDPEVYDPFRFDSENPQKRSPLAFIPFSAGPRNCIGQTFAMNEMKVAVALTLLRFRLLPDD 495

  Fly   479 QRVECIVNIVLRSETGFQL 497
            :.......::||:|.|..|
  Rat   496 KEPRRKPELILRAEGGLWL 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 159/472 (34%)
Cyp4f17NP_001178915.1 p450 52..514 CDD:278495 159/472 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348567
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

Return to query results.
Submit another query.