DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d8 and cyp46a1.4

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:XP_005160404.1 Gene:cyp46a1.4 / 393451 ZFINID:ZDB-GENE-040426-1224 Length:501 Species:Danio rerio


Alignment Length:521 Identity:144/521 - (27%)
Similarity:248/521 - (47%) Gaps:65/521 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LLFLLVVLLFGA--GWIIHLGQADRRRKVANLPGP--------ICPPLIGAMQLMLRLNPKTFIK 56
            ::|.|:..:|.|  .:.:::...  .:|..::|||        ..|.|..:|.....|....|: 
Zfish     9 IIFYLLSAVFTAFLAYCLYIHYV--HQKYDHIPGPPRDNFLFGHSPSLTKSMYADDSLIHDLFL- 70

  Fly    57 VGREYVLKFGHLQRVWIFNRLLIMSGDAELNEQLLSSQEHLVKHP-VYKVL-----GQWLGNGLL 115
               ::..|:|.:.|:...:.:.|:....|..:.:|.|.:: .|.| ||:.|     .::||.||:
Zfish    71 ---QWAEKYGPVYRINSLHYIAIVVHCPEATKTILMSPKY-TKDPFVYRRLFNLFGKRFLGYGLI 131

  Fly   116 LS-DGKVWHQRRKIITPTFHFSILEQFVEVFDQQSNICVQRLAQKANGNTFDVYRSIC-AAALDI 178
            .: |..:|:::|:|:.|.|..|.|...:..||:.|...:.:|.:.||..|..|...:. ...||:
Zfish   132 TAVDHDIWYRQRRIMDPAFSSSYLRSLISTFDEMSERLMDKLEEMANNKTPAVMHDLVNCVTLDV 196

  Fly   179 IAETAMGTKIYAQANESTPYAEAVNECTALLSWRFMSVYLQVELLFTLTHPHLKWRQTQLIRTMQ 243
            |.:.|.|..:...|.:.:|:..||..|.     ..|:|.|: :..|.|...:  |:....||...
Zfish   197 ICKVAFGVDLNFLAQKDSPFQNAVELCL-----NGMTVDLR-DPFFRLFPKN--WKLIHQIRDAA 253

  Fly   244 EFTIKV----IEKRRQALEDQQSKLMDTADEDVGSKRRMALLDVLLMSTVDGRPLTNDEIREEVD 304
            |...|.    |:.|:.|:::         .|||...    :|..:|.|..:......|::.:.:|
Zfish   254 ELLRKTGEKWIQNRKTAVKN---------GEDVPKD----ILTQILKSAEEENVNNTDDLEQMLD 305

  Fly   305 ---TFMFEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELKYMECVI 366
               ||...|.:||.:.|||.:..|.|:||:..:...|:.:||||  .|.:|..|||:..|:..|:
Zfish   306 NFVTFFIAGQETTANQLSFAIMALGRNPEIYKRAKAEVDEVLGT--KREISNEDLGKFTYLSQVL 368

  Fly   367 KESLRMYPPVPIVGRKLQTDFKYTHSVHGDGV-IPAGSEIIIGIFGVHRQPETFPNPDEFIPERH 430
            ||:||:||..|...|.|..|...      :|: ||.|..::...:...|..:.|.:|.:|.|||.
Zfish   369 KETLRLYPTAPGTNRWLHEDMVI------NGIKIPGGCSVMFSSYVSQRLEKFFKDPLKFDPERF 427

  Fly   431 ENGSRVAPFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVR--EYELLPMGQRVECIVNIVLRSET 493
            :..:....:...||:.|||.|:||.|:|:|.|::|||:::  |:.|:| ||..:......||.::
Zfish   428 DVNAPKPYYCYFPFALGPRTCLGQVFSQMEAKVVLAKLLQRFEFSLVP-GQSFDIKDTGTLRPKS 491

  Fly   494 G 494
            |
Zfish   492 G 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 130/447 (29%)
cyp46a1.4XP_005160404.1 p450 39..495 CDD:278495 139/489 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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