DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d8 and Cyp4e3

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_523527.1 Gene:Cyp4e3 / 34291 FlyBaseID:FBgn0015035 Length:526 Species:Drosophila melanogaster


Alignment Length:539 Identity:188/539 - (34%)
Similarity:305/539 - (56%) Gaps:50/539 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLFLLVVLLFGAGWIIHLGQ--ADRRRKVANLPGPICPPLIGAMQLMLRLNPKTFIKVGREYVL 63
            |.|.:|.:|:.....:::..:  :.||:.:....||...|::|... .:..||...:....::..
  Fly     1 MWLAVLALLVLPLITLVYFERKASQRRQLLKEFNGPTPVPILGNAN-RIGKNPAEILSTFFDWWY 64

  Fly    64 KFGHLQRV-WI-FNRLLIMSGDAELNEQLLSSQEHLVKHPVYKVLGQWLGNGLLLSDGKVWHQRR 126
            .:|....: || ::..::|:...:| |.:|:||:.:.|..:|.:|..|||:|||.|.|..||:.|
  Fly    65 DYGKDNFLFWIGYSSHIVMTNPKQL-EYILNSQQLIQKSTIYDLLHPWLGHGLLTSFGSKWHKHR 128

  Fly   127 KIITPTFHFSILEQFVEVFDQQSNICVQRLAQKANGNT-FDVYRSICAAALDIIAETAMGTKIYA 190
            |:|||:|||:||:.|.||.::.|...:.:|.:.:.|:| .|.........||:|.:||||..|.|
  Fly   129 KMITPSFHFNILQDFHEVMNENSAKFMTQLKKASAGDTIIDFQEHANYLTLDVICDTAMGVPINA 193

  Fly   191 QANESTPYAEAVNECTALLSWRFMSVYLQVELLFTLTHPHLKWRQTQLIRTMQEFTIKVIEKRRQ 255
            .....:...:|..:....::.|....:.:...:|:||.....:::|  ::|:|:||..:||||..
  Fly   194 MEQRDSSIVQAFRDMCYNINMRAFHPFKRSNRVFSLTPEFSAYQKT--LKTLQDFTYDIIEKRVY 256

  Fly   256 ALEDQQSKLMDTADEDVG-SKRRMALLDVLLMSTVDGRPLTNDEIREEVDTFMFEGHDTTTSALS 319
            ||::..||    .|.|.. .:::||.||.||.||:||||||..||.|||.||||||||||||.:|
  Fly   257 ALQNGGSK----EDHDPSLPRKKMAFLDTLLSSTIDGRPLTRQEIYEEVSTFMFEGHDTTTSGVS 317

  Fly   320 FCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELKYMECVIKESLRMYPPVPIVGRKLQ 384
            |.::.|||||:||.|:..|..:|:|.|.:|.||.:::.::||::..|||:.|:||.||.:||...
  Fly   318 FSVYLLSRHPDVQRKLYREQCEVMGHDMNRSVSFQEIAKMKYLDLFIKEAQRVYPSVPFIGRYCD 382

  Fly   385 TDFKYTHSVHGDGVIPAGSEIIIGIFGVHRQPETFPNPDEFIPERHENGSRVAPFKMIPFSAGPR 449
            .|:    .::| .::|.|:.:.:.:..:......|.:|..|.|||.|. .:.|||:.:|||||||
  Fly   383 KDY----DING-SIVPKGTTLNLALILLGYNDRIFKDPHHFRPERFEE-EKPAPFEYLPFSAGPR 441

  Fly   450 NCIGQKFAQLEMKMMLAKIVREYELLP---------------MG-------------QRVECIVN 486
            ||||||||.||:|.:::|:||.:|:||               :|             .:.:.|::
  Fly   442 NCIGQKFALLELKTVISKVVRSFEVLPAVDELVSTDGRLNTYLGLAPDEKLKREAGRHKYDPILS 506

  Fly   487 IV--LRSETGFQLGMRKRK 503
            .|  |:|:.|..|.:|:|:
  Fly   507 AVLTLKSDNGLHLRLRERR 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 173/464 (37%)
Cyp4e3NP_523527.1 p450 35..468 CDD:278495 171/446 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449020
Domainoid 1 1.000 101 1.000 Domainoid score I1781
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 170 1.000 Inparanoid score I1543
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D10482at33392
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 1 1.000 - - mtm8393
orthoMCL 1 0.900 - - OOG6_100014
Panther 1 1.100 - - P PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
109.900

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