DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d8 and erg11

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_592990.1 Gene:erg11 / 2542599 PomBaseID:SPAC13A11.02c Length:495 Species:Schizosaccharomyces pombe


Alignment Length:483 Identity:103/483 - (21%)
Similarity:190/483 - (39%) Gaps:103/483 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 TFIKVGREYVLKFGHLQRVWIFNRLLIMSGDAELNEQLLSSQEHLV-----KHPVYKVLGQWLGN 112
            ||:.:||:.....|.....::||..|     |:||.:  .:..||.     |..||.:       
pombe    69 TFVCMGRKMTAFLGVQGNDFLFNGKL-----ADLNAE--EAYSHLTTPVFGKDVVYDI------- 119

  Fly   113 GLLLSDGKVWHQRRKIITPTFHFSILEQFVEVFDQQSNICVQRLAQKANG--NTFDVYRSICAAA 175
                 ...|:.:.:|.|.....||....:|.:...:.:..:........|  ...|:.:::....
pombe   120 -----PNHVFMEHKKFIKSGLGFSQFRSYVPLILNEMDAFLSTSPDFGPGKEGVADLLKTMPVMT 179

  Fly   176 LDIIAETAMGTKIYAQANESTPYAEAVNECTALLSWRFMSVYLQVELLFTLTHPHLKW------- 233
            :...:.|..|.::....:..                 |..:|..::..|:..:....|       
pombe   180 IYTASRTLQGAEVRKGFDAG-----------------FADLYHDLDQGFSPVNFVFPWLPLPRNR 227

  Fly   234 RQTQLIRTMQEFTIKVIEKRRQALEDQQSKLMDTADEDVGSKRRMALLDVLLMSTV--DGRPLTN 296
            |:.:..:.||:..:|:|:.||.:.|:..:.::.|                 |||..  |||||..
pombe   228 RRDRAHKIMQKTYLKIIKDRRSSTENPGTDMIWT-----------------LMSCKYRDGRPLKE 275

  Fly   297 DEIREEVDTFMFEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPV-SIRDLGELK 360
            .||...:...:..|..|:.:.:.:.|..|...||:...:.||..:|:|.:..... ..:|:..|.
pombe   276 HEIAGMMIALLMAGQHTSAATIVWVLALLGSKPEIIEMLWEEQKRVVGENLELKFDQYKDMPLLN 340

  Fly   361 YMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDG-VIPAGSEIIIGIFGVHRQPETFPNPDE 424
            |   ||:|:||::||:....||::.|.    .|.|.. ||||.:.::........:.|.|.:..:
pombe   341 Y---VIQETLRLHPPIHSHMRKVKRDL----PVPGSKIVIPANNYLLAAPGLTATEEEYFTHATD 398

  Fly   425 FIPER-------HENGSRV------------APFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVR 470
            |.|:|       .||..::            :|:  :||.||...|||::||.:.:..:::|.|.
pombe   399 FDPKRWNDRVNEDENAEQIDYGYGLVTKGAASPY--LPFGAGRHRCIGEQFAYMHLSTIISKFVH 461

  Fly   471 EYELLPMGQRVECIVNIVLRSETGFQLG 498
            :|....:|:    :.|:...|.....||
pombe   462 DYTWTLIGK----VPNVDYSSMVALPLG 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 97/467 (21%)
erg11NP_592990.1 CypX 28..495 CDD:225035 103/483 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 101 1.000 Domainoid score I1781
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 102 1.000 Inparanoid score I1639
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

Return to query results.
Submit another query.