DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d8 and Cyp4x1

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_663708.1 Gene:Cyp4x1 / 246767 RGDID:628719 Length:507 Species:Rattus norvegicus


Alignment Length:513 Identity:147/513 - (28%)
Similarity:260/513 - (50%) Gaps:40/513 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LLFLLVVLLFGAGWIIHLGQADRRRKVANLPGPICPPLIGAMQLMLRLNPKTFIKVGREYVLKFG 66
            |:|.|.::|..| ..::|.:....|.:...|||....|:|..:.:...|.:...::.:||...| 
  Rat    18 LVFCLALVLMQA-VKLYLRRQRLLRDLRPFPGPTAHWLLGHQKFLQEDNMEKLDEIVKEYPCAF- 80

  Fly    67 HLQRVWI--FNRLLIMSGDAELNEQLLSSQEHLVKHPVYKVLGQWLGNGLLLSDGKVWHQRRKII 129
               ..|:  |.....:. |.:..:..||..:...:: :::::..:||.|||..||..|.|.|.::
  Rat    81 ---PCWVGPFQAFFYIY-DPDYAKIFLSRTDPKTQY-LHQLMTPFLGRGLLNLDGPRWFQHRCLL 140

  Fly   130 TPTFHFSILEQFVEVFDQQSNICVQRLAQ--KANGNTFDVYRSICAAALDIIAETAMGTKIYAQA 192
            ||.||..||:..|::.....|:.:.:..:  .....|.:|:..|....||||.:.|.|.:...|.
  Rat   141 TPAFHQDILKPCVDMMAHSVNMMLDKWEKTWTTQETTIEVFEHINLMTLDIIMKCAFGQETNCQI 205

  Fly   193 N---ESTPYAEAVNECTALLSWRFMSVYLQVELLFTLTHPHLKWRQTQLIRTMQEFTIKVIEKRR 254
            |   ||  |.:|..|...::|.|..:.:...:::|.|: |.....| :|.:.:.:.|.|:|:.|:
  Rat   206 NGTYES--YVKATFELGEIISSRLYNFWHHHDIIFKLS-PKGHCFQ-ELGKVIHQCTEKIIQDRK 266

  Fly   255 QALEDQQSKLMDTADEDVGSKRRMALLDVLLMSTV-DGRPLTNDEIREEVDTFMFEGHDTTTSAL 318
            :.|:||.::      :|..:.:.  .||::|.:.. |.:..::.::|.||:|||:.|||.:.:::
  Rat   267 KTLKDQVNQ------DDTQTSQN--FLDIVLSAQAGDEKAFSDADLRSEVNTFMWAGHDASAASI 323

  Fly   319 SFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELKYMECVIKESLRMYPPVPIVGRKL 383
            |:.|:.|:.:||.|.:...||..:||...|  ::...|.|:.|....|||:||:.||:|.:.|:|
  Rat   324 SWLLYCLALNPEHQDRCRTEIRSILGDGSS--ITWEQLDEIPYTTMCIKETLRLIPPIPSISREL 386

  Fly   384 QTDFKYT--HSVHGDGVIPAGSEIIIGIFGVHRQPETFPNPDEFIPER--HENGSRVAPFKMIPF 444
            .......  ||      :|||..:::.|:|:|..|..:.:|..|.|.|  .||..:..|...:||
  Rat   387 SKPLTLPDGHS------LPAGMTVVLSIWGLHHNPAVWKDPKVFDPLRFTKENSEQRHPCAFLPF 445

  Fly   445 SAGPRNCIGQKFAQLEMKMMLAKIVREYELLPMGQRVECI-VNIVLRSETGFQLGMRK 501
            |:||||||||:||.||:|:.:|..:..:.:.....|.... .:.|||.:.|..|.::|
  Rat   446 SSGPRNCIGQQFAMLELKVAIALTLLRFRVAADLTRPPAFSSHTVLRPKHGIYLHLKK 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 129/443 (29%)
Cyp4x1NP_663708.1 CYP4B-like 66..500 CDD:410771 132/459 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348518
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

Return to query results.
Submit another query.