DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d8 and Tbxas1

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_035669.3 Gene:Tbxas1 / 21391 MGIID:98497 Length:533 Species:Mus musculus


Alignment Length:568 Identity:138/568 - (24%)
Similarity:233/568 - (41%) Gaps:140/568 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLVVLLFGAGWIIHLGQADRRRKVANLPGPICPPLIGAMQLMLRLNPKTFIKVG--------REY 61
            |||.||....|  :...|..|.:...:..|...|.:|.:.         |.:.|        || 
Mouse    20 LLVALLALLKW--YSMSAFSRLEKLGIRHPKPSPFVGNLM---------FFRQGFWESQLELRE- 72

  Fly    62 VLKFGHLQRVWIFNRLLIMSGDAELNEQLLSSQEHLVKHPVYKVLGQWLGNG----------LLL 116
              ::|.|...::..|:.::..:.::.:|:|...        :......:.:|          |||
Mouse    73 --RYGPLCGYYLGRRMHVVISEPDMIKQVLVEN--------FSNFSNRMASGLEPKMVADSVLLL 127

  Fly   117 SDGKVWHQRRKIITPTFHFSILEQFVEVFDQQSNICVQRLAQ-KANGNTFDVYRSICAAALDIIA 180
            .|.: |.:.|..:..:|....|::...:..|...:.|..|.: .|:.:.|::.|..|...:|::|
Mouse   128 RDRR-WEEVRGALMSSFSPEKLDEMTPLISQACELLVAHLKRYAASRDAFNIQRCYCCYTIDVVA 191

  Fly   181 ETAMGTKIYAQANESTPYAEAVNECTA----------LLSWRFMSVYLQVELLFTLTHPHLKWRQ 235
            ..|.||::.:|.:...|:.:.....:.          :||:..:.|.| ..:|.......|....
Mouse   192 SVAFGTQVDSQNSPEDPFVQHCRRASTFCIPRPLLVLILSFPSIMVPL-ARILPNKNRDELNGFF 255

  Fly   236 TQLIRTMQEFTIKVIEKRRQALEDQQSKLMDTADEDVGSKRRMALLDVLL-----MSTV------ 289
            ..|||       .||     ||.|||:     |:|     ||...|.::|     |::|      
Mouse   256 NTLIR-------NVI-----ALRDQQA-----AEE-----RRRDFLQMVLDAQHSMNSVGVEGFD 298

  Fly   290 -----------------------DGRPLTNDEIREEVDTFMFEGHDTTTSALSFCLHELSRHPEV 331
                                   ..:|.|.|||..:...|:..||:..|:.|||..:.|:.||:.
Mouse   299 MVPESLSSSECTKEPPQRCHPTSTSKPFTVDEIVGQAFLFLIAGHEVITNTLSFITYLLATHPDC 363

  Fly   332 QAKMLEEIVQVLGTDRSRPV-SIRDLGE-LKYMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVH 394
            |.::|:|:...:|   ..|. ....|.| |.|::.||.|:||||||.          |::|....
Mouse   364 QERLLKEVDLFMG---KHPAPEYHSLQEGLPYLDMVISETLRMYPPA----------FRFTREAA 415

  Fly   395 GD-----GVIPAGSEIIIGIFGVHRQPETFPNPDEFIPERHENGSRV--APFKMIPFSAGPRNCI 452
            .|     ..||||:.:.|.:..:|..||.:|||:.|.|||....:|:  .||..:||.||||:|:
Mouse   416 QDCEVLGQRIPAGTVLEIAVGALHHDPEHWPNPETFDPERFTAEARLQRRPFTYLPFGAGPRSCL 480

  Fly   453 GQKFAQLEMKMMLAKIVRE--YELLPMGQRVECIVNIVLRSETGFQLG 498
            |.:...|.:|:.:.:::.:  :|..|..|       :.|:.|:...||
Mouse   481 GVRLGLLVVKLTILQVLHKFRFEASPETQ-------VPLQLESKSALG 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 121/496 (24%)
Tbxas1NP_035669.3 p450 47..528 CDD:365848 130/539 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2429
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.930

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