DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d8 and cyp-29A3

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_503130.2 Gene:cyp-29A3 / 189649 WormBaseID:WBGene00021412 Length:503 Species:Caenorhabditis elegans


Alignment Length:508 Identity:174/508 - (34%)
Similarity:259/508 - (50%) Gaps:70/508 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLFLLVVLLFGAGWIIHLGQADRRRKVANLPGPICPPLIGAMQLMLRLNPKTFIK--------- 56
            :::.||.::.|   |.|.......|:....||||...|:.|        |.|||..         
 Worm     9 LIILLLFIVSF---WKIMKNILKYRKYDDLLPGPPAHPIFG--------NTKTFSNKTTEEIFQA 62

  Fly    57 ---VGREYVLKFGHLQRVWIFNRLLIMSGDAELNEQLLSSQEHLVKHPVYKVLGQWLGNGLLLSD 118
               :..|.|.|...|.|..|.....:...|.:...::|.|...|.|...|:....|||.|.||..
 Worm    63 LRDLFSEAVEKGQSLIRHRILGTFYVWPLDGKTVSKILESTTELDKGGPYEFFNDWLGGGTLLEG 127

  Fly   119 -GKVWHQRRKIITPTFHFSILEQFVEVFDQQSNI---CVQRLAQKANGNTFDVYRSICAAALDII 179
             |:.|...||::||||||:.||.:.|||:.:|.:   |:.:.|:  :|.|.|::.......||.|
 Worm   128 YGERWRSHRKMLTPTFHFAKLEGYFEVFNTESRVVVDCLDKFAK--SGETVDLFPFFKRCTLDTI 190

  Fly   180 AETAMGTKIYAQANESTPYAEAVNECTALLSWRFMSVYLQVELLFTLTHPH-----LKW------ 233
            .:||||.|:.||...|.||..|:.:.            ||:.:|:.: :||     :.|      
 Worm   191 CKTAMGAKVDAQLQNSHPYITAIEQA------------LQLGVLYAM-NPHHQIPAIYWALGHQK 242

  Fly   234 RQTQLIRTMQEFTIKVIEKRRQALEDQQSKLMDTADEDVGSKRRMALLDVLLMSTVDGRPLTNDE 298
            ::.:....|:.||..||.:||.|.|..:.       |...|||.|..||:|| |..:...|:.::
 Worm   243 KKDEYFNIMKTFTRNVIAERRTARESGEV-------EKETSKRNMNFLDILL-SNEESSVLSPED 299

  Fly   299 IREEVDTFMFEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELKYME 363
            :|:|||||||.||||||:::|:....|:.||::|..:.||||.|.|.|.:..|:...:.:|:|.|
 Worm   300 LRQEVDTFMFAGHDTTTTSVSWVCWNLAHHPDIQQNVYEEIVSVFGEDPNEDVTTEGIKKLEYTE 364

  Fly   364 CVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDGVIPAGSEIIIGIFGVHRQPETFPNPDEFIPE 428
            .::|||.|:.|.||.|.|:|.:|.:.     |..:||||:.:.|....:|:....:.|||.|.|:
 Worm   365 RMLKESKRICPTVPAVLRQLISDMEI-----GGVLIPAGANVAIAPMAIHKNANIYQNPDIFDPD 424

  Fly   429 R---HENGSRVAPFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYELLPMG 478
            |   .|...|.| :..||||||.|||||||||||..|:|:..:::.:::.|||
 Worm   425 RFLPEETAKRHA-YDFIPFSAGLRNCIGQKFAQLNEKVMVIHLLKNFKIEPMG 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 155/431 (36%)
cyp-29A3NP_503130.2 p450 37..477 CDD:278495 167/477 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163486
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4598
OMA 1 1.010 - - QHG28797
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.910

Return to query results.
Submit another query.