DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d8 and cyp-34A1

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_506787.1 Gene:cyp-34A1 / 188399 WormBaseID:WBGene00011698 Length:504 Species:Caenorhabditis elegans


Alignment Length:519 Identity:123/519 - (23%)
Similarity:209/519 - (40%) Gaps:88/519 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLVVLLFGAGWIIHLGQADRRRKVANLP-GPICPPLIGAMQLMLRLNPKT--FIKVGREYVLKFG 66
            :.:||||..  ||.|..|.:.|....|| ||...||||.:..:|....|.  .::...|....||
 Worm     1 MFLVLLFFT--IISLALAHQWRARKQLPRGPYPLPLIGNLHQLLYYCWKNGGLVEGYAEIQKSFG 63

  Fly    67 HLQRVWIFNRLLIMSGDAELNEQLLSSQEH---------LVKHPVYKVLGQWLGNGLLLSDGKVW 122
            .:..:||.....:...|.|:..:....:.|         |:.:..|:       .|::.|:|:.:
 Worm    64 KVYTLWIGPLPTVFIADFEVAHETHVKRAHEFGTRYAPGLMNYNRYE-------RGVVASNGEFF 121

  Fly   123 HQRRKIITPTF-HF----SILEQFV--------EVFDQQSNICVQRLAQKANGNTFDVYRSICAA 174
            .:..:.:..|| :|    :|:|:.:        |.|...:.||         .....::.:....
 Worm   122 QEHSRFVLSTFRNFASGRNIMEERIMDEYRYRFEDFASSNGIC---------NKERKIFETWARP 177

  Fly   175 ALDIIAETAMG-TKIYAQANESTPYAEAVNECTA--LLSWRFMSVYLQVELLFTLTHPHLKWRQT 236
            ..|::..:.:. ..|..:..::.|..|.:....|  ..:..|:.::..|.:   |....|||||.
 Worm   178 FFDLLTGSVINKILINERFEQNDPEFEKLVSRLAKGFENTGFLDIFCPVRI---LESRFLKWRQD 239

  Fly   237 QLIRTMQ---EFTIKVIEKRRQALEDQQSKLMDTADEDVGSKRRMALLDVLLMSTVDGRPLTNDE 298
            .:.....   |...|.|.:|...|:..:..|.|..|:         .||..|:.      :..|:
 Worm   240 TIFEPFNYILELNKKSIARRVAQLKADEHVLSDDPDD---------FLDAYLLK------MQKDK 289

  Fly   299 IREEVDTFMFE------------GHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPV 351
            ......||..|            |.:||::.|::....|...|:|.....||:::|.|..||  :
 Worm   290 NEGLETTFTLENLAVDMYDLWLGGQETTSTTLNWACACLLNRPDVITTAREELIRVTGGHRS--L 352

  Fly   352 SIRDLGELKYMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDGVIPAGSEIIIGIFGVHRQP 416
            |:.|..|..|:..||.|..|.   ..|:...|....|....|.|. .:.||:.:...|..:|...
 Worm   353 SLIDRRETPYLSAVISEVQRF---ASILNMNLFRIIKEDTVVDGQ-PLRAGTAVTAHIAMIHVDE 413

  Fly   417 ETFPNPDEFIPERH-ENGSRVAPFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYELLPMGQ 479
            :.|.|..||.|||. ||..  ...|:|||..|.|:|:|:..|:.|:.::|..::.:|:|.|:|:
 Worm   414 DLFKNHTEFRPERFLENDD--LDKKLIPFGIGRRSCLGESLAKAELYLVLGNLLLDYDLEPVGE 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 102/455 (22%)
cyp-34A1NP_506787.1 p450 26..498 CDD:278495 113/492 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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