DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d8 and cyp-13A1

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_001369869.1 Gene:cyp-13A1 / 188361 WormBaseID:WBGene00011677 Length:519 Species:Caenorhabditis elegans


Alignment Length:515 Identity:136/515 - (26%)
Similarity:228/515 - (44%) Gaps:81/515 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RRRKVANLPGPICPPLIGAMQLMLRLNPKTFIKVGREYVLKFGHLQRVWIFN----RLLIMSGDA 84
            |||.|.   ||:..|::|.....|. |...|....||:..|||   :::.|.    :.|::|...
 Worm    28 RRRGVV---GPMGFPVLGVFLNSLD-NNFPFPLQCREWTKKFG---KIYGFTEGTLKTLVISDPE 85

  Fly    85 ELNEQLLSSQEHLV---KHPVYKVLGQWLGNGLLLSDGKVWHQRRKIITPTFHFSILEQFVEVFD 146
            .::|..::..::..   ::|:.....:.....|..:.|..|.:.|.|.:|||..|.|.:..:..:
 Worm    86 LVHEVFVTQYDNFYGRKRNPIQGDSEKEKRTNLFAAQGFRWKRLRAISSPTFSNSSLRKLYQTVE 150

  Fly   147 QQSNICVQRL-AQKANGNTFDVYRSICAAALDIIAETAMG-TKIYAQANESTPYAEAVNECTALL 209
            ..:...::.: .|.|.|...|:.:......||:|...||| |......|...|..      :.|.
 Worm   151 DSALELLRHIEKQSAGGKQIDMLKFYQEFTLDVIGRIAMGQTDSQMFKNPIMPIV------SKLF 209

  Fly   210 SWRFMSVYL--------QVELLFTLTHPHLKWRQTQLIRTMQEFTIKVIEKR-RQALEDQQSKL- 264
            ...|..::|        .||::..:...:||   ....|.:.|.|:..|..| :|..|||::.: 
 Worm   210 QGNFAKLFLIGGIFPTFLVEIIRQILLKNLK---VGSFRKINEITLDAIHNRIKQREEDQKNGIE 271

  Fly   265 -----------MDTADEDV---GSKRRMALLDVLLMSTVDGRPLTNDEIREEVDTFMFEGHDTTT 315
                       :|...|||   |....    |....:|...|.||.:||..:...|:..|.|||.
 Worm   272 IGEPADFIDLFLDAKAEDVEHFGENNG----DFSKSTTYTNRQLTTEEIVGQCTVFLIAGFDTTA 332

  Fly   316 SALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRP---VSIRDLGELKYMECVIKESLRMYPPVP 377
            .:||:..:.|:.|||:|.|:.||:      :|..|   |:|..|.:|||||||.||:||:||   
 Worm   333 LSLSYATYLLATHPEIQKKLQEEV------NRECPNPEVTIDQLSKLKYMECVFKEALRLYP--- 388

  Fly   378 IVG-----RKLQTDFKYTHSVHGDGVIPAGSEIIIGIFGVHRQPETF-PNPDEFIPERHENGSRV 436
             :|     |:...:.|.     |:..:..|:.|.:..:.:|..|..: .:.::|.|||.:..:..
 Worm   389 -LGAFANSRRCMRNTKL-----GNMKVEVGTMIQVDTWTLHTDPNIWGDDAEDFKPERWQTPNSD 447

  Fly   437 APFK---MIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYELLPMGQRVECIVNIVLRSET 493
            ..::   .|||..|||.|||.:.|.:|.|::|..|:|:: ....|.:.|..:.::.|:.|
 Worm   448 QIYQKSGYIPFGLGPRQCIGMRLAYMEEKILLVHILRKF-TFETGAKTEIPLKLIGRATT 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 121/473 (26%)
cyp-13A1NP_001369869.1 CYP3A-like 64..510 CDD:410678 123/475 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2429
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.