DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d8 and cyp-29A4

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_505490.2 Gene:cyp-29A4 / 181926 WormBaseID:WBGene00007140 Length:502 Species:Caenorhabditis elegans


Alignment Length:523 Identity:175/523 - (33%)
Similarity:266/523 - (50%) Gaps:58/523 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLFLLVVLLFGAGWIIHLGQADRRRKVANLPGPICPPLIGAMQLMLRLNPK----TFIKVGREY 61
            :|.|...:.|....||..          ..:|||...|:.|...|......|    .|:::..|.
 Worm    16 LLSFYDTIRLMRKFWIYG----------GKMPGPPAHPIFGNASLFKNKTTKDFVELFVQLAHEA 70

  Fly    62 VLKFGHLQRVWIFNRLLIMSGDAELNEQLLSSQEHLVKHPVYKVLGQWLGNGLLLSDGKVWHQRR 126
            ..|..:|.|..:.||:.:...:.:....:|.|...:.|...|..|..|||.|||:..|:.|...|
 Worm    71 RSKGANLMRTQVMNRIYVWPLNGKTAATILESSTEVNKGDDYAFLVPWLGGGLLMEKGEKWKSHR 135

  Fly   127 KIITPTFHFSILEQFVEVFDQQSNI---CVQRLAQKANGNTFDVYRSICAAALDIIAETAMGTKI 188
            :|:||.|||:.||.:::||:.:|.|   |::::|:  ...|.|::.......||||..||||.|:
 Worm   136 RILTPAFHFAKLEGYLDVFNSESKILIDCLEKIAE--TQETVDLFPFFKRCTLDIICGTAMGIKL 198

  Fly   189 YAQANESTPYAEAV---NECTALLS-----W-RFMSVYLQVELLFTLTHPHLKWRQTQLIRTMQE 244
            .||...:..|.:||   |:.|...|     | ||  ||      :.|.:..:   ....:.|:::
 Worm   199 DAQNVHNLGYVQAVEGFNKLTVEYSLNPFLWNRF--VY------WALGYQKM---HDDFLYTLKK 252

  Fly   245 FTIKVIEKRRQALEDQQSKLMDTADEDVGSKRRMALLDVLLMSTVDGRPLTNDEIREEVDTFMFE 309
            ||...|.:||..:...:.       |...|||:|..||:||.|. :...||:||||:|||||||.
 Worm   253 FTNDAIVERRTVIASGEI-------EKETSKRKMNFLDILLNSE-ESNELTSDEIRKEVDTFMFA 309

  Fly   310 GHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELKYMECVIKESLRMYP 374
            |||||:::||:....::.:||||..:.:||:.:.|.|.::.|:..::..|:|.|.|:|||.||:|
 Worm   310 GHDTTSTSLSWLCWNIAHNPEVQENVYKEIISIFGEDPNQDVTSENINRLEYTERVLKESKRMFP 374

  Fly   375 PVPIVGRKLQTDFKYTHSVHGDGV-IPAGSEIIIGIFGVHRQPETFPNPDEFIPERH--ENGSRV 436
            |||...|||..|...      ||: ||:...|.|....:|..|..:.||::|.|:|.  |..::.
 Worm   375 PVPGFQRKLTKDIVI------DGITIPSEGNITISPTVLHCNPFVYQNPEKFDPDRFLPEECAKR 433

  Fly   437 APFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYELLPMGQRVEC--IVNIVLRSETGFQLGM 499
            ..:..||||||.||||||||:.|..|:||..|:|.::|.|..:..|.  :..:|.:...|..:.:
 Worm   434 HSYDYIPFSAGLRNCIGQKFSILNEKVMLIHILRNFKLEPKLEFYETKPLFEVVAKPSHGIPVKL 498

  Fly   500 RKR 502
            .||
 Worm   499 IKR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 158/447 (35%)
cyp-29A4NP_505490.2 p450 37..473 CDD:278495 164/462 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163498
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4598
OMA 1 1.010 - - QHG28797
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.910

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