DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d8 and cyp-42A1

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_507688.2 Gene:cyp-42A1 / 180236 WormBaseID:WBGene00013585 Length:511 Species:Caenorhabditis elegans


Alignment Length:510 Identity:180/510 - (35%)
Similarity:279/510 - (54%) Gaps:26/510 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVVLLFGAGWIIHLGQADRR-----RKVANLPGPICPPLIGAMQLMLRLNPKTFIK--VGREYVL 63
            |:||..  .||||.  |.|:     .|:....||...||||... ....:|:.|.:  .|..|::
 Worm     8 LIVLTI--TWIIHF--AFRKAKFIYNKLTVFQGPAALPLIGNFH-QFHFSPEEFFEQSQGIAYMM 67

  Fly    64 KFG--HLQRVWIFNRLLIMSGDAELNEQLLSSQEHLVKHPVYKVLGQWLGNGLLLSDGKVWHQRR 126
            :.|  .:.|||:.....::...|...|.:|.|.:.|.|..:|..|..|:|:|||:|....|..||
 Worm    68 RKGDERITRVWLGGLPFVLLYGAHEVEAILGSPKMLNKPFLYGFLSAWIGDGLLISKPDKWRPRR 132

  Fly   127 KIITPTFHFSILEQFVEVFDQQSNICVQRL-AQKANGNTFDVYRSICAAALDIIAETAMGTKIYA 190
            |::|||||:.||:.||||:::.....:.:. ||...|...||:.:|....||:|.|.|:||.|.|
 Worm   133 KLLTPTFHYDILKDFVEVYNRHGRTLLSKFEAQAGTGEYSDVFHTITLCTLDVICEAALGTSINA 197

  Fly   191 QANESTPYAEAVNECTALLSWRFMSVYLQVELLFTLTHPHLKWRQTQLIRTMQEFTIKVIEKRRQ 255
            |.:..:||.:||.:...::..|.:..:...:.:|.|..|..:  ..:.::.:.|||.|.|..|:.
 Worm   198 QKDPHSPYLDAVFKMKDIVFQRLLRPHYFSDTIFNLIGPGKE--HDECVKILHEFTSKAIYARKA 260

  Fly   256 ALEDQQSKLMDTADEDVGSKRRMALLDVLLMSTVDGRPLTNDEIREEVDTFMFEGHDTTTSALSF 320
            .::.........|.|....:||||.||::|.....|. |..:.|.||||||.|||||||::|:::
 Worm   261 KVDAAGGVEQLLAQETAEGRRRMAFLDLMLDMNSKGE-LPMEGICEEVDTFTFEGHDTTSAAMNW 324

  Fly   321 CLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELKYMECVIKESLRMYPPVPIVGRKLQT 385
            .||.:..:||:|:|:.:||.:||| :..||||..|||:|||:|...||:||:||.||::.|:...
 Worm   325 FLHLMGANPEIQSKVQKEIDEVLG-EADRPVSYEDLGKLKYLEACFKETLRLYPSVPLIARQCVE 388

  Fly   386 DFKYTHSVHGDGVIPAGSEIIIGIFGVHRQPETFPNPDEFIPERHENGSRVAPFKMIPFSAGPRN 450
            |.:    |.|. .:|:|:.:::....||:.|..:.:|:.|.|||...|....|:..||||||.||
 Worm   389 DIQ----VRGH-TLPSGTAVVMVPSMVHKDPRYWDDPEIFNPERFITGELKHPYAYIPFSAGSRN 448

  Fly   451 CIGQKFAQLEMKMMLAKIVREYELLPMGQRVECIV--NIVLRSETGFQLGMRKRK 503
            |||.:||.:|.|.:||.|::..::....:..|..|  .:::|...|.:|...||:
 Worm   449 CIGMRFAMMEEKCILAIILKNLKVKAKLRTDEMRVAAELIIRPLYGNELKFEKRE 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 157/435 (36%)
cyp-42A1NP_507688.2 p450 35..499 CDD:278495 168/473 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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